Regulog RSc1790 - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By TF family - LacI
- By pathway - Sugar utilization
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | 6 | 1 |
| Ralstonia pickettii 12J | 6 | 1 |
| Ralstonia metallidurans CH34 | 6 | 1 |
| Ralstonia eutropha JMP134 | ||
| Ralstonia eutropha H16 | 6 | 1 |
| Cupriavidus taiwanensis | 6 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| RSc1790 |
*
Ralstonia solanacearum GMI1000 Site: position = -38 score = 6.13062 sequence = CGATGTAAACGTTTACAAGC Gene: RS04189: Predicted sugar utilization transcriptional regulator, LacI family |
*
Ralstonia pickettii 12J Site: position = -35 score = 6.02252 sequence = GCATGTAAACGTTTACACCT Gene: Rpic_1419: Predicted sugar utilization transcriptional regulator, LacI family |
*
Ralstonia metallidurans CH34 Site: position = -52 score = 6.69266 sequence = CAATGAAAACGTTTTCATCG Gene: Rmet_4839: Predicted sugar utilization transcriptional regulator, LacI family |
|
*
Ralstonia eutropha H16 Site: position = -2 score = 6.69266 sequence = CAATGAAAACGTTTTCATCC Gene: H16_B1599: Predicted sugar utilization transcriptional regulator, LacI family |
*
Cupriavidus taiwanensis Site: position = -74 score = 6.58457 sequence = GAATGAAAACGTTTTCATTT Gene: RALTA_A1435: Predicted sugar utilization transcriptional regulator, LacI family |
Predicted sugar utilization transcriptional regulator, LacI family |
| RSc1791 |
Gene: RS04190: Predicted sugar ABC transporter, substrate-binding protein |
Gene: Rpic_1418: Predicted sugar ABC transporter, substrate-binding protein |
Gene: Rmet_4840: Predicted sugar ABC transporter, substrate-binding protein |
|
Gene: H16_B1600: Predicted sugar ABC transporter, substrate-binding protein |
Gene: RALTA_A1434: Predicted sugar ABC transporter, substrate-binding protein |
Predicted sugar ABC transporter, substrate-binding protein |
| RSc1792 |
Gene: RS04191: Predicted sugar ABC transporter, permease protein 1 |
Gene: Rpic_1417: Predicted sugar ABC transporter, permease protein 1 |
Gene: Rmet_4841: Predicted sugar ABC transporter, permease protein 1 |
|
Gene: H16_B1601: Predicted sugar ABC transporter, permease protein 1 |
Gene: RALTA_A1433: Predicted sugar ABC transporter, permease protein 1 |
Predicted sugar ABC transporter, permease protein 1 |
| RSc1793 |
Gene: RS04192: Predicted sugar ABC transporter, permease protein 2 |
Gene: Rpic_1416: Predicted sugar ABC transporter, permease protein 2 |
Gene: Rmet_4842: Predicted sugar ABC transporter, permease protein 2 |
|
Gene: H16_B1602: Predicted sugar ABC transporter, permease protein 2 |
Gene: RALTA_A1432: Predicted sugar ABC transporter, permease protein 2 |
Predicted sugar ABC transporter, permease protein 2 |
| RSc1794 |
Gene: RS04193: Predicted sugar ABC transporter, ATP-binding protein |
Gene: Rpic_1415: Predicted sugar ABC transporter, ATP-binding protein |
Gene: Rmet_4843: Predicted sugar ABC transporter, ATP-binding protein |
|
Gene: H16_B1603: Predicted sugar ABC transporter, ATP-binding protein |
Gene: RALTA_A1431: Predicted sugar ABC transporter, ATP-binding protein |
Predicted sugar ABC transporter, ATP-binding protein |
| RSc1795 |
Gene: RS04195: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: Rpic_1414: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: Rmet_4844: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
|
Gene: H16_B1604: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Gene: RALTA_A1430: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |