Statistics of regulated genes

Genome	Genes	Operons
Azotobacter vinelandii AvOP	8	3
Pseudomonas aeruginosa PAO1	8	2
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf-5	5	2
Pseudomonas mendocina ymp
Pseudomonas putida KT2440	8	3
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. tomato str. DC3000

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes									Function
CRON 1.
kguE	* Azotobacter vinelandii AvOP Site: position = -31 score = 6.53795 sequence = AAATGAAACCGGTTTCAGAG Gene: Avin_26880: Epimerase KguE	* Pseudomonas aeruginosa PAO1 Site: position = -28 score = 6.53795 sequence = AAATGAAACCGGTTTCAGAG Gene: PA2260: Epimerase KguE	Pseudomonas entomophila L48	* Pseudomonas fluorescens Pf-5 Site: position = -2 score = 6.53795 sequence = AAATGAAACCGGTTTCAGAG Gene: PFL_2720: Epimerase KguE	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -31 score = 6.67144 sequence = AAATGAAACCGGTTTCATAA Gene: PP3379: Epimerase KguE	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Epimerase KguE
kguK	Azotobacter vinelandii AvOP Gene: Avin_26890: 2-ketogluconate kinase (EC 2.7.1.13)	Pseudomonas aeruginosa PAO1 Gene: PA2261: 2-ketogluconate kinase (EC 2.7.1.13)	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_2719: 2-ketogluconate kinase (EC 2.7.1.13)	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3378: 2-ketogluconate kinase (EC 2.7.1.13)	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	2-ketogluconate kinase (EC 2.7.1.13)
kguT	Azotobacter vinelandii AvOP Gene: Avin_26900: 2-ketogluconate transporter	Pseudomonas aeruginosa PAO1 Gene: PA2262: 2-ketogluconate transporter	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_2718: 2-ketogluconate transporter	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3377: 2-ketogluconate transporter	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	2-ketogluconate transporter
kguD	Azotobacter vinelandii AvOP Gene: Avin_26910: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)	Pseudomonas aeruginosa PAO1 Gene: PA2263: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_2717: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3376: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
gadC	* Azotobacter vinelandii AvOP Site: position = -334 score = 5.77834 sequence = CAATGAAATCGGTTTCAATC Gene: Avin_00890: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas aeruginosa PAO1 Gene: PA2264: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_0053: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -136 score = 6.42608 sequence = GCATGAAACCGGTTTCAAAA Gene: PP3384: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
gadB	Azotobacter vinelandii AvOP Gene: Avin_00900: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas aeruginosa PAO1 Gene: PA2265: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_0054: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3383: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
gadA	Azotobacter vinelandii AvOP Gene: Avin_00910: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas aeruginosa PAO1 Gene: PA2266: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5 Gene: PFL_0055: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3382: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
CRON 2.
ptxS	* Azotobacter vinelandii AvOP Site: position = -65 score = 6.42608 sequence = TACTGAAACCGGTTTCAAGC Gene: Avin_26870: 2-ketogluconate utilization repressor PtxS, LacI family	* Pseudomonas aeruginosa PAO1 Site: position = -87 score = 6.52801 sequence = TTCTGAAACCGGTTTCAACT Gene: PA2259: 2-ketogluconate utilization repressor PtxS, LacI family	Pseudomonas entomophila L48	* Pseudomonas fluorescens Pf-5 Site: position = -59 score = 6.46978 sequence = TCCTGAAACCGGTTTCAGCG Gene: PFL_2721: 2-ketogluconate utilization repressor PtxS, LacI family	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -47 score = 6.61771 sequence = TATTGAAACCGGTTTCATCA Gene: PP3380: 2-ketogluconate utilization repressor PtxS, LacI family	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	2-ketogluconate utilization repressor PtxS, LacI family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD