Regulon of PtxS in Pseudomonas putida KT2440
| Regulator type: | Transcription factor |
| TF locus tag: | PP3380 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | 2-ketogluconate utilization |
| Effector: | 2-keto-D-gluconate |
| Regulog: | PtxS - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - LacI
- By effector - 2-keto-D-gluconate
- By pathway - 2-ketogluconate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -47
Score: 6.6 Sequence: TATTGAAACCGGTTTCATCA
Locus tag: PP3380
Name: ptxS Funciton: 2-ketogluconate utilization repressor PtxS, LacI family |
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ptxS
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2-ketogluconate utilization repressor PtxS, LacI family
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Position: -136
Score: 6.4 Sequence: GCATGAAACCGGTTTCAAAA
Locus tag: PP3384
Name: gadC Funciton: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
Locus tag: PP3383
Name: gadB Funciton: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
Locus tag: PP3382
Name: gadA Funciton: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c |
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gadC
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Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
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gadB
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Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein
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gadA
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Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c
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Position: -31
Score: 6.7 Sequence: AAATGAAACCGGTTTCATAA
Locus tag: PP3379
Name: kguE Funciton: Epimerase KguE
Locus tag: PP3378
Name: kguK Funciton: 2-ketogluconate kinase (EC 2.7.1.13)
Locus tag: PP3377
Name: kguT Funciton: 2-ketogluconate transporter
Locus tag: PP3376
Name: kguD Funciton: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) |
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kguE
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Epimerase KguE
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kguK
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2-ketogluconate kinase (EC 2.7.1.13)
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kguT
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2-ketogluconate transporter
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kguD
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2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |