Regulog BirA - Streptococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | BirA |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By trascription factor - BirA
- By TF family - BirA
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| SAG0465 |
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Streptococcus agalactiae 2603V/R Site: position = -79 score = 7.98278 sequence = ATTGTAAAC-(16)-GTTAACAAT Gene: SAG0465: putative thioesterase |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -32 score = 7.95649 sequence = AAAGTTAAC-(16)-GGTGACAAT Gene: SDEG_0560: putative thioesterase |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -32 score = 7.8237 sequence = AAAGTTAAC-(16)-GGTTACAAT Gene: Sez_1400: putative thioesterase |
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putative thioesterase |
| yhfS |
Gene: LACR_1956: Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
Gene: L25946: Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
Gene: SAG0466: Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
Gene: SDEG_0561: Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
Gene: Sez_1399: Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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Streptococcus pyogenes M1 GAS Site: position = -269 score = 6.46373 sequence = AAAGTCACC-(16)-GGTTACAGT Gene: SPy0524: Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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Putative acetyl-CoA acetyltransferase (EC 2.3.1.9) |
| yhfT |
Gene: LACR_1955: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -79 score = 7.41687 sequence = ACAGTAACC-(16)-GTTAACTGT Gene: L24742: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
Gene: SAG0467: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
Gene: SDEG_0562: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
Gene: Sez_1398: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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Gene: SPy0526: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
| LACR_2462 |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -136 score = 7.22946 sequence = ATAGTAACC-(16)-GTTAACTGC Gene: LACR_1954: Transposase |
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Transposase |
| CRON 2. | ||||||||||||||||
| bioY |
Gene: LACR_0357: Substrate-specific component BioY of biotin ECF transporter |
Gene: L1011: Substrate-specific component BioY of biotin ECF transporter |
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*
Streptococcus gallolyticus UCN34 Site: position = -52 score = 8.66198 sequence = TTAGTTAAC-(16)-GTTAACTAA Gene: GALLO_1527: Substrate-specific component BioY of biotin ECF transporter |
*2
Streptococcus gordonii str. Challis substr. CH1 Site: position = -35 score = 8.55306 sequence = ATAGTTACC-(16)-GTTTACTAT Gene: SGO_0746: Substrate-specific component BioY of biotin ECF transporter Gene: SGO_1070: Substrate-specific component BioY of biotin ECF transporter |
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Streptococcus mitis B6 Site: position = -87 score = 8.34502 sequence = TTTGTTACC-(16)-GTTGACAAT Site: position = -35 score = 8.17947 sequence = ATAGTTACT-(16)-GTTAACTAT Gene: smi_0834: Substrate-specific component BioY of biotin ECF transporter |
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Streptococcus pneumoniae TIGR4 Site: position = -35 score = 8.17947 sequence = ATAGTTACT-(16)-GTTAACTAT Site: position = -87 score = 7.39502 sequence = TTTGTTACC-(16)-GTTGACATC Gene: SP_0783: Substrate-specific component BioY of biotin ECF transporter |
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Streptococcus sanguinis SK36 Site: position = -36 score = 8.55306 sequence = ATAGTTACC-(16)-GTTTACTAT Gene: SSA_1536: Substrate-specific component BioY of biotin ECF transporter |
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Streptococcus suis 05ZYH33 Site: position = -33 score = 7.79421 sequence = TTTGTTAAC-(16)-GATAACAAA Gene: SSU05_0509: Substrate-specific component BioY of biotin ECF transporter |
*2
Streptococcus thermophilus CNRZ1066 Site: position = -35 score = 7.84135 sequence = TAAGTTAAC-(16)-GTTAACTCA Site: position = -89 score = 8.66198 sequence = TTAGTTAAC-(16)-GTTGACTAA Gene: str0674: Substrate-specific component BioY of biotin ECF transporter Site: position = -171 score = 7.90485 sequence = AAAGTTAAC-(16)-GTTAACATA Gene: str1308: Substrate-specific component BioY of biotin ECF transporter |
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Substrate-specific component BioY of biotin ECF transporter |
| CRON 3. | ||||||||||||||||
| bioB |
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Streptococcus agalactiae 2603V/R Site: position = -78 score = 8.35637 sequence = ATTGTTAAC-(16)-GTTTACAAT Gene: SAG0464: Biotin synthase (EC 2.8.1.6) |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -50 score = 7.45011 sequence = AAAGTAAAC-(16)-GGTAACAAT Gene: SDEG_0379: Biotin synthase (EC 2.8.1.6) |
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Streptococcus gallolyticus UCN34 Site: position = -51 score = 7.98339 sequence = ACAGTTAAC-(16)-GTTAACTGT Gene: GALLO_1916: Biotin synthase (EC 2.8.1.6) |
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Biotin synthase (EC 2.8.1.6) |
| bioD |
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Gene: GALLO_1915: Dethiobiotin synthetase (EC 6.3.3.3) |
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Dethiobiotin synthetase (EC 6.3.3.3) |
| bioY2 |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -98 score = 7.39609 sequence = GCAGTTAAC-(16)-GGTTACTAT Gene: LACR_1953: Substrate-specific component BioY of biotin ECF transporter |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -99 score = 7.43287 sequence = ACAGTTAAC-(16)-GGTTACTGT Gene: L24031: Substrate-specific component BioY of biotin ECF transporter |
2
Streptococcus agalactiae 2603V/R Gene: SAG0398: Substrate-specific component BioY of biotin ECF transporter Gene: SAG0463: Substrate-specific component BioY of biotin ECF transporter |
Gene: SDEG_1996: Substrate-specific component BioY of biotin ECF transporter |
Gene: Sez_0192: Substrate-specific component BioY of biotin ECF transporter |
2
Streptococcus gallolyticus UCN34 Gene: GALLO_1914: Substrate-specific component BioY of biotin ECF transporter Gene: GALLO_2101: Substrate-specific component BioY of biotin ECF transporter |
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Streptococcus mutans UA159 Site: position = -48 score = 8.74599 sequence = ATAGTTAAC-(16)-GTTAACTAA Gene: SMU.1827: Substrate-specific component BioY of biotin ECF transporter |
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Gene: SPy0207: Substrate-specific component BioY of biotin ECF transporter |
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Gene: SUB1709: Substrate-specific component BioY of biotin ECF transporter |
Substrate-specific component BioY of biotin ECF transporter |
| birA |
Gene: LACR_1952: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: L0191: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SAG0830: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SDEG_1373: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: Sez_0678: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: GALLO_0768: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SGO_0903: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: smi_0511: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SMU.1578: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SP_1900: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SPy1362: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SSA_0999: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SSU05_1625: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: str1173: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Gene: SUB1213: Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
Biotin biosynthesis repressor; Biotin-protein ligase (EC 6.3.4.15) |
| yemC |
Gene: LACR_1951: Zinc finger protein |
Gene: L200067: Zinc finger protein |
*
Streptococcus agalactiae 2603V/R Site: position = -72 score = 8.40516 sequence = TTTGTTAAC-(15)-GTTGACAAT Gene: SAG0397: Zinc finger protein |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -73 score = 8.66535 sequence = ATAGTTACC-(16)-GTTGACAAA Gene: SDEG_1997: Zinc finger protein |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -74 score = 8.07496 sequence = TTAGTAACC-(16)-GTTGACAAA Gene: Sez_0191: Zinc finger protein |
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Streptococcus gallolyticus UCN34 Site: position = -69 score = 8.20667 sequence = AGAGTTAAC-(16)-GTTGACTAA Gene: GALLO_2102: Zinc finger protein |
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Gene: SP_1428: Zinc finger protein |
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Streptococcus pyogenes M1 GAS Site: position = -73 score = 8.37211 sequence = ACAGTTACC-(16)-GTTGACAAA Gene: SPy0205: Zinc finger protein |
Gene: SSA_1540: Zinc finger protein |
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Gene: str0673: Zinc finger protein |
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Streptococcus uberis 0140J Site: position = -61 score = 7.87566 sequence = TTTGTTACC-(16)-GTTGACACA Gene: SUB1710: Zinc finger protein |
Zinc finger protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |