Regulog PdxR - Streptococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine biosynthesis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Lactococcus lactis subsp. cremoris SK11 | ||
| Lactococcus lactis subsp. lactis Il1403 | ||
| Streptococcus agalactiae 2603V/R | ||
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 3 | 2 |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | 3 | 2 |
| Streptococcus gallolyticus UCN34 | 3 | 2 |
| Streptococcus gordonii str. Challis substr. CH1 | 2 | 2 |
| Streptococcus mitis B6 | ||
| Streptococcus mutans UA159 | 3 | 2 |
| Streptococcus pneumoniae TIGR4 | ||
| Streptococcus pyogenes M1 GAS | 3 | 2 |
| Streptococcus sanguinis SK36 | 3 | 2 |
| Streptococcus suis 05ZYH33 | ||
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus uberis 0140J |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| pdxR |
|
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Gene: SAG0099: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -62 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SDEG_1023: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -50 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: Sez_0950: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus gallolyticus UCN34 Site: position = -63 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: GALLO_1111: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus gordonii str. Challis substr. CH1 Site: position = 62 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SGO_0963: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
Gene: smi_0739: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus mutans UA159 Site: position = -61 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SMU.953c: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
Gene: SP_1393: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus pyogenes M1 GAS Site: position = -63 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SPy1210: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Streptococcus sanguinis SK36 Site: position = -19 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SSA_1401: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
Gene: SSU05_0562: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
Gene: str1287: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
|
Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
| CRON 2. | ||||||||||||||||
| pdxK |
|
|
|
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -71 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SDEG_1022: Pyridoxal kinase (EC 2.7.1.35) |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -61 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: Sez_0951: Pyridoxal kinase (EC 2.7.1.35) |
*
Streptococcus gallolyticus UCN34 Site: position = -94 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: GALLO_1110: Pyridoxal kinase (EC 2.7.1.35) |
*
Streptococcus gordonii str. Challis substr. CH1 Site: position = -71 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SGO_0964: Pyridoxal kinase (EC 2.7.1.35) |
|
*
Streptococcus mutans UA159 Site: position = -68 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SMU.954: Pyridoxal kinase (EC 2.7.1.35) |
|
*
Streptococcus pyogenes M1 GAS Site: position = -58 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SPy1209: Pyridoxal kinase (EC 2.7.1.35) |
*
Streptococcus sanguinis SK36 Site: position = -52 score = 9.16515 sequence = TATTGTA-(18)-TACAATA Gene: SSA_1400: Pyridoxal kinase (EC 2.7.1.35) |
Gene: SSU05_1580: Pyridoxal kinase (EC 2.7.1.35) |
Gene: str1284: Pyridoxal kinase (EC 2.7.1.35) |
|
Pyridoxal kinase (EC 2.7.1.35) |
| pdxU |
|
|
|
Gene: SDEG_1021: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Gene: Sez_0952: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Gene: GALLO_1109: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Gene: SGO_0965: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
|
Gene: SMU.955: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
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Gene: SPy1208: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Gene: SSA_1399: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Gene: SSU05_1579: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Gene: str1283: Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
|
Substrate-specific component PdxU of predicted pyridoxine ECF transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |