Regulog RbsR2 - Streptococcaceae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Ribose utilization
Effector:	Ribose
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Streptococcaceae
By TF family - LacI
By effector - Ribose
By pathway - Ribose utilization

Statistics of regulated genes
Genome	Genes	Operons
Lactococcus lactis subsp. cremoris SK11	4	1
Lactococcus lactis subsp. lactis Il1403	6	1
Streptococcus agalactiae 2603V/R	6	1
Streptococcus dysgalactiae subsp. equisimilis GGS_124	5	1
Streptococcus equi subsp. zooepidemicus MGCS10565	6	1
Streptococcus gallolyticus UCN34
Streptococcus gordonii str. Challis substr. CH1
Streptococcus mitis B6
Streptococcus mutans UA159
Streptococcus pneumoniae TIGR4
Streptococcus pyogenes M1 GAS	1	1
Streptococcus sanguinis SK36
Streptococcus suis 05ZYH33
Streptococcus thermophilus CNRZ1066
Streptococcus uberis 0140J	6	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
rbsR2	* Lactococcus lactis subsp. cremoris SK11 Site: position = -66 score = 6.02234 sequence = AAATGAAAACGGATACAATC Gene: LACR_1803: Transcriptional repressor of ribose utilization RbsR2, LacI family	* Lactococcus lactis subsp. lactis Il1403 Site: position = -66 score = 6.20633 sequence = TAATGAAAACGGATACAATT Gene: L0145: Transcriptional repressor of ribose utilization RbsR2, LacI family	* Streptococcus agalactiae 2603V/R Site: position = -38 score = 5.37924 sequence = TTGTGAAACCGTTTCCACAA Gene: SAG0119: Transcriptional repressor of ribose utilization RbsR2, LacI family	* Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -67 score = 6.04811 sequence = AAAAGAAAACGGTTACAACA Site: position = -43 score = 5.40656 sequence = ACGTGAGAACGGTTCCACAA Gene: SDEG_1537: Transcriptional repressor of ribose utilization RbsR2, LacI family	* Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -62 score = 6.27021 sequence = TTTAGAAAACGGTTACAATA Site: position = -39 score = 5.5586 sequence = ACATGAGAACGGTTCCACAA Gene: Sez_0468: Transcriptional repressor of ribose utilization RbsR2, LacI family	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	* Streptococcus pyogenes M1 GAS Site: position = -367 score = 3.69238 sequence = CATAAAAAACGGTTGAACCA Gene: SPy1535: Transcriptional repressor of ribose utilization RbsR2, LacI family	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	* Streptococcus uberis 0140J Site: position = -47 score = 6.67471 sequence = TAAAGAAAACGGTTACAATA Gene: SUB1312: Transcriptional repressor of ribose utilization RbsR2, LacI family	Transcriptional repressor of ribose utilization RbsR2, LacI family
rbsK	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1802: Ribokinase (EC 2.7.1.15)	Lactococcus lactis subsp. lactis Il1403 Gene: L86157: Ribokinase (EC 2.7.1.15)	Streptococcus agalactiae 2603V/R Gene: SAG0118: Ribokinase (EC 2.7.1.15)	Streptococcus dysgalactiae subsp. equisimilis GGS_124 Gene: SDEG_1536: Ribokinase (EC 2.7.1.15)	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_0469: Ribokinase (EC 2.7.1.15)	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1311: Ribokinase (EC 2.7.1.15)	Ribokinase (EC 2.7.1.15)
rbsD	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1801: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)	Lactococcus lactis subsp. lactis Il1403 Gene: L85737: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)	Streptococcus agalactiae 2603V/R Gene: SAG0117: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)	Streptococcus dysgalactiae subsp. equisimilis GGS_124 Gene: SDEG_1535: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_0470: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1310: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)	D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
rbsA	Lactococcus lactis subsp. cremoris SK11 Gene: LACR_1800: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	Lactococcus lactis subsp. lactis Il1403 Gene: L84240: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	Streptococcus agalactiae 2603V/R Gene: SAG0116: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	Streptococcus dysgalactiae subsp. equisimilis GGS_124 Gene: SDEG_1534: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_0471: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1309: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
rbsC	Lactococcus lactis subsp. cremoris SK11	Lactococcus lactis subsp. lactis Il1403 Gene: L83296: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	Streptococcus agalactiae 2603V/R Gene: SAG0115: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	Streptococcus dysgalactiae subsp. equisimilis GGS_124	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_0472: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1308: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
rbsB	Lactococcus lactis subsp. cremoris SK11	Lactococcus lactis subsp. lactis Il1403 Gene: L82310: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	Streptococcus agalactiae 2603V/R Gene: SAG0114: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	Streptococcus dysgalactiae subsp. equisimilis GGS_124 Gene: SDEG_1533: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	Streptococcus equi subsp. zooepidemicus MGCS10565 Gene: Sez_0473: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	Streptococcus gallolyticus UCN34	Streptococcus gordonii str. Challis substr. CH1	Streptococcus mitis B6	Streptococcus mutans UA159	Streptococcus pneumoniae TIGR4	Streptococcus pyogenes M1 GAS	Streptococcus sanguinis SK36	Streptococcus suis 05ZYH33	Streptococcus thermophilus CNRZ1066	Streptococcus uberis 0140J Gene: SUB1307: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog RbsR2 - Streptococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --