Regulog RegR - Streptococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Hyaluronate utilization |
| Effector: | Hyaluronate oligosaccharide phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - LacI
- By effector - Hyaluronate oligosaccharide phosphate
- By pathway - Hyaluronate utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactococcus lactis subsp. cremoris SK11 | ||
| Lactococcus lactis subsp. lactis Il1403 | ||
| Streptococcus agalactiae 2603V/R | 12 | 3 |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 6 | 2 |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | 10 | 2 |
| Streptococcus gallolyticus UCN34 | ||
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus mitis B6 | ||
| Streptococcus mutans UA159 | ||
| Streptococcus pneumoniae TIGR4 | 15 | 3 |
| Streptococcus pyogenes M1 GAS | 12 | 3 |
| Streptococcus sanguinis SK36 | ||
| Streptococcus suis 05ZYH33 | 14 | 2 |
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus uberis 0140J |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| hylD |
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Streptococcus agalactiae 2603V/R Site: position = -32 score = 5.12804 sequence = AAAGTAAACCGGTAAACTCA Site: position = -251 score = 5.09009 sequence = GAAGTAAACCTGTTTACATG Site: position = -222 score = 5.85934 sequence = AAAGTAAACCGGTTTTGTCA Gene: SAG1902: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -33 score = 5.3494 sequence = TAAGTAAACCGGTAAACTAA Site: position = -280 score = 5.11186 sequence = AAAGTAAACTAGTTTTGTCA Gene: SDEG_0648: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -281 score = 6.0807 sequence = TAAGTAAACCTGTTTACCAA Site: position = -33 score = 5.3494 sequence = TAAGTAAACCGGTAAACTAA Gene: Sez_1304: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
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Streptococcus pneumoniae TIGR4 Site: position = -219 score = 5.62835 sequence = CTAGTAAACCGGTTTTGTCA Site: position = -37 score = 5.03919 sequence = AAAGTAAACCGGTAAACCTA Gene: SP_0321: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
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Streptococcus pyogenes M1 GAS Site: position = -33 score = 4.6043 sequence = TGAGTAAACCGGTAAACCGA Site: position = -281 score = 5.11186 sequence = AAAGTAAACTAGTTTTGTCA Gene: SPy0634: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
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Streptococcus suis 05ZYH33 Site: position = -33 score = 4.91289 sequence = TAGGTAAACCGGTAAAGTTA Gene: SSU05_1221: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
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PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69) |
| ugl |
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Gene: SAG1901: Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
Gene: SDEG_0647: Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
Gene: Sez_1305: Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
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Gene: SP_0322: Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
Gene: SPy0632: Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
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Gene: SSU05_1220: Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
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Unsaturated glucuronyl hydrolase (EC 3.2.1.-) |
| hylE |
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Gene: SAG1900: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
Gene: SDEG_0646: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
Gene: Sez_1306: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
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Gene: SP_0323: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
Gene: SPy0631: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
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Gene: SSU05_1219: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
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PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69) |
| hylF |
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Gene: SAG1899: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
Gene: SDEG_0645: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
Gene: Sez_1307: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
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Gene: SP_0324: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
Gene: SPy0630: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
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Gene: SSU05_1218: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
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PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69) |
| hylG |
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Gene: SAG1898: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
Gene: SDEG_0644: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
Gene: Sez_1308: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
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Gene: SP_0325: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
Gene: SPy0629: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
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Gene: SSU05_1217: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
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PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69) |
| yajC |
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Gene: SP_0326: Preprotein translocase subunit YajC (TC 3.A.5.1.1) |
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Gene: SSU05_1216: Preprotein translocase subunit YajC (TC 3.A.5.1.1) |
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Preprotein translocase subunit YajC (TC 3.A.5.1.1) |
| ohl |
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Gene: SAG1897: Oligohyaluronate lyase (EC 4.2.2.-) |
Gene: SDEG_0643: Oligohyaluronate lyase (EC 4.2.2.-) |
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2
Streptococcus pneumoniae TIGR4 Gene: SP_0327: Oligohyaluronate lyase (EC 4.2.2.-) Gene: SP_0329: Oligohyaluronate lyase (EC 4.2.2.-) |
Gene: SPy0628: Oligohyaluronate lyase (EC 4.2.2.-) |
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Gene: SSU05_1211: Oligohyaluronate lyase (EC 4.2.2.-) |
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Oligohyaluronate lyase (EC 4.2.2.-) |
| SP_1439 |
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Gene: SP_0328: IS1380-Spn1, transposase |
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IS1380-Spn1, transposase |
| regR |
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Gene: SAG1896: Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
Gene: SDEG_0642: Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
Gene: Sez_1309: Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
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Gene: SP_0330: Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
Gene: SPy0627: Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
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Gene: SSU05_1210: Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
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Transcriptional regulator of hyaluronate and KDG utilization, LacI family |
| hyl |
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*
Streptococcus agalactiae 2603V/R Site: position = -42 score = 5.03814 sequence = AGGAAAAACCGGTTTACAAT Gene: SAG1197: Hyaluronate lyase precursor (EC 4.2.2.1) |
Gene: SDEG_0654: Hyaluronate lyase precursor (EC 4.2.2.1) |
Gene: Sez_1299: Hyaluronate lyase precursor (EC 4.2.2.1) |
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Streptococcus pneumoniae TIGR4 Site: position = -89 score = 6.23897 sequence = TAATTAAACCGGTTTACTTA Gene: SP_0314: Hyaluronate lyase precursor (EC 4.2.2.1) |
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Streptococcus pyogenes M1 GAS Site: position = -54 score = 5.45941 sequence = TTAGTAAATCAATTTACTTT Gene: SPy1032: Hyaluronate lyase precursor (EC 4.2.2.1) |
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4
Streptococcus suis 05ZYH33 Gene: SSU05_1214: Hyaluronate lyase precursor (EC 4.2.2.1) Gene: SSU05_1215: Hyaluronate lyase precursor (EC 4.2.2.1) Gene: SSU05_1212: Hyaluronate lyase precursor (EC 4.2.2.1) Gene: SSU05_1213: Hyaluronate lyase precursor (EC 4.2.2.1) |
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Hyaluronate lyase precursor (EC 4.2.2.1) |
| kduD |
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Streptococcus agalactiae 2603V/R Site: position = -265 score = 5.12804 sequence = TGAGTTTACCGGTTTACTTT Site: position = -46 score = 5.09009 sequence = CATGTAAACAGGTTTACTTC Site: position = -75 score = 5.85934 sequence = TGACAAAACCGGTTTACTTT Gene: SAG1904: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -74 score = 5.11186 sequence = TGACAAAACTAGTTTACTTT Site: position = -45 score = 6.0807 sequence = TTGGTAAACAGGTTTACTTA Gene: SDEG_0650: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -293 score = 5.3494 sequence = TTAGTTTACCGGTTTACTTA Site: position = -45 score = 6.0807 sequence = TTGGTAAACAGGTTTACTTA Gene: Sez_1303: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
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Streptococcus pneumoniae TIGR4 Site: position = -253 score = 5.03919 sequence = TAGGTTTACCGGTTTACTTT Site: position = -71 score = 5.62835 sequence = TGACAAAACCGGTTTACTAG Gene: SP_0320: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
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Streptococcus pyogenes M1 GAS Site: position = -45 score = 6.0807 sequence = TTGGTAAACAGGTTTACTTA Site: position = -74 score = 5.11186 sequence = TGACAAAACTAGTTTACTTT Gene: SPy0636: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
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Streptococcus suis 05ZYH33 Site: position = -75 score = 5.82847 sequence = TGACAAAACCGGTTTACTAT Gene: SSU05_1225: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
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2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) |
| kduI |
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Gene: SAG1905: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
Gene: SDEG_0651: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
Gene: Sez_1302: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
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Gene: SP_0319: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
Gene: SPy0637: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
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Gene: SSU05_1224: 5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
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5-keto-4-deoxyuronate isomerase (EC 5.3.1.17) |
| kdgK |
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Gene: SAG1906: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
Gene: SDEG_0652: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
Gene: Sez_1301: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
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Gene: SP_0318: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
Gene: SPy0638: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
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Gene: SSU05_1223: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
| kdgA |
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Gene: SAG1907: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: SDEG_0653: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: Sez_1300: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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Gene: SP_0317: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Gene: SPy0639: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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Gene: SSU05_1222: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |