Regulog NrdR - Chlamydiales
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Chlamydiae |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NrdR
- By taxonomy - Chlamydiales
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Chlamydia muridarum Nigg | 2 | 1 |
| Chlamydia trachomatis D/UW-3/CX | 2 | 1 |
| Chlamydophila abortus S26/3 | 2 | 1 |
| Chlamydophila caviae GPIC | 2 | 1 |
| Chlamydophila felis Fe/C-56 | 2 | 1 |
| Chlamydophila pneumoniae AR39 | 2 | 1 |
| Parachlamydia sp. UWE25 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| nrdD |
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Parachlamydia sp. UWE25 Site: position = -137 score = 3.61068 sequence = TTAAAATAAATTCTGT Site: position = -44 score = 4.81248 sequence = CTACAAGATCTTGTAT Gene: pc0111: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
| CRON 2. | ||||||||
| nrdA |
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Chlamydia muridarum Nigg Site: position = -201 score = 5.35322 sequence = CTTCTATATATGGTAT Site: position = -169 score = 5.16302 sequence = TCACAATATCTTGGGT Gene: TC0214: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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Chlamydia trachomatis D/UW-3/CX Site: position = -201 score = 5.35322 sequence = CTTCTATATATGGTAT Site: position = -169 score = 5.16302 sequence = TCACAATATCTTGGGT Gene: CT827: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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Chlamydophila abortus S26/3 Site: position = -211 score = 5.66229 sequence = TTCCTATATATGGTAT Site: position = -179 score = 5.37946 sequence = TCACTACATATTGGGT Gene: CAB745: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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Chlamydophila caviae GPIC Site: position = -178 score = 5.37946 sequence = TCACTACATATTGGGT Site: position = -210 score = 5.66229 sequence = TTCCTATATATGGTAT Gene: CCA00777: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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Chlamydophila felis Fe/C-56 Site: position = -210 score = 5.66229 sequence = TTCCTATATATGGTAT Site: position = -178 score = 5.37946 sequence = TCACTACATATTGGGT Gene: CF0237: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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Chlamydophila pneumoniae AR39 Site: position = -180 score = 5.37946 sequence = TCACTACATATTGGGT Site: position = -212 score = 5.26589 sequence = TTCCTATATATGGTAG Gene: CP0872: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
| nrdB |
Gene: TC0215: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: CT828: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: CAB744: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: CCA00776: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: CF0238: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: CP0871: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |