Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog ykoK - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: ykoK
RFAM: RF00380
Regulation mode:
Biological process: Magnesium homeostasis
Effector: Magnesium ion, (Mg2+)
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4
Streptococcus gallolyticus UCN34
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus suis 05ZYH33
Lactococcus lactis subsp. lactis Il1403 1 1
Lactococcus lactis subsp. cremoris SK11 1 1
Streptococcus uberis 0140J
Streptococcus agalactiae 2603V/R
Streptococcus sanguinis SK36 2 1
Streptococcus pyogenes M1 GAS
Streptococcus mutans UA159
Streptococcus thermophilus CNRZ1066
Streptococcus gordonii str. Challis substr. CH1 1 1
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
SSA_1735
 
Streptococcus pneumoniae TIGR4
 
Streptococcus gallolyticus UCN34
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus suis 05ZYH33
 
Lactococcus lactis subsp. lactis Il1403
 
Lactococcus lactis subsp. cremoris SK11
 
Streptococcus uberis 0140J
 
Streptococcus agalactiae 2603V/R
*
Streptococcus sanguinis SK36

Site:
position = -307
score = 66.06
sequence = AGTGAAAAATCGGTA...

Gene: SSA_1735: hypothetical protein
 
Streptococcus pyogenes M1 GAS
 
Streptococcus mutans UA159
 
Streptococcus thermophilus CNRZ1066
 
Streptococcus gordonii str. Challis substr. CH1
 
Streptococcus equi subsp. zooepidemicus MGCS10565
 
Streptococcus mitis B6
hypothetical protein
mgtB
 
Streptococcus pneumoniae TIGR4
 
Streptococcus gallolyticus UCN34
 
Streptococcus dysgalactiae subsp. equisimilis GGS_124
 
Streptococcus suis 05ZYH33
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -420
score = 90.87
sequence = GCATAGCCGTCGGTA...

Gene: L85514: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -413
score = 93.65
sequence = GCATAGCCATCGGTA...

Gene: LACR_1370: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
 
Streptococcus uberis 0140J
 
Streptococcus agalactiae 2603V/R
 
Streptococcus sanguinis SK36

Gene: SSA_1734: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
 
Streptococcus pyogenes M1 GAS
 
Streptococcus mutans UA159
 
Streptococcus thermophilus CNRZ1066
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -430
score = 65.36
sequence = AATGGAAAATCGGTA...

Gene: SGO_1634: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
 
Streptococcus equi subsp. zooepidemicus MGCS10565
*
Streptococcus mitis B6

Site:
position = -346
score = 64.4
sequence = GAAAACGGTAGGTGA...

Gene: smi_1923: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
Mg(2+) transport ATPase, P-type (EC 3.6.3.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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