Regulog Rex - Deinococcus-Thermus
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Deinococcus-Thermus |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Rex
- By taxonomy - Deinococcus-Thermus
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Genome | Genes | Operons |
|---|---|---|
| Deinococcus deserti VCD115 | 17 | 3 |
| Deinococcus geothermalis DSM 11300 | 17 | 3 |
| Deinococcus radiodurans R1 | 16 | 2 |
| Thermus aquaticus Y51MC23 | 13 | 1 |
| Thermus thermophilus HB27 | 13 | 1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| nadC |
*
Deinococcus deserti VCD115 Site: position = -37 score = 5.35652 sequence = GCGTGATTTCTCTCACAA Gene: Deide_13560: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
*
Deinococcus geothermalis DSM 11300 Site: position = -46 score = 5.41994 sequence = ACGTGATTTCGTTCACGA Gene: Dgeo_1163: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
|
Gene: TaqDRAFT_5291: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
Gene: TTC0621: Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) |
| nadA |
Gene: Deide_13570: Quinolinate synthetase (EC 4.1.99.-) |
Gene: Dgeo_1164: Quinolinate synthetase (EC 4.1.99.-) |
|
Gene: TaqDRAFT_5288: Quinolinate synthetase (EC 4.1.99.-) |
Gene: TTC0620: Quinolinate synthetase (EC 4.1.99.-) |
Quinolinate synthetase (EC 4.1.99.-) |
| CRON 2. | ||||||
| nuoA |
*
Deinococcus deserti VCD115 Site: position = -87 score = 5.18375 sequence = TCGTGCGGTTTTTCACGT Gene: Deide_05090: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Deinococcus geothermalis DSM 11300 Site: position = -83 score = 5.56036 sequence = TCGTGCGTTTTTTCACGA Gene: Dgeo_0909: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Deinococcus radiodurans R1 Site: position = 56 score = 4.69162 sequence = TCGTGCCTCTTTTCACGA Gene: DR1506: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Thermus aquaticus Y51MC23 Site: position = -30 score = 5.01871 sequence = TCGTGAAGAGAGGCACGA Gene: TaqDRAFT_4255: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Thermus thermophilus HB27 Site: position = -30 score = 5.01871 sequence = TCGTGAAGAAAGGCACGA Gene: TTC1920: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
| nuoB |
Gene: Deide_05100: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Dgeo_0910: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: DR1505: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: TaqDRAFT_4256: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: TTC1919: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
| nuoC |
Gene: Deide_05110: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Dgeo_0911: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: DR1504: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: TaqDRAFT_4257: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: TTC1918: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
| nuoD |
Gene: Deide_05120: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Dgeo_0912: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: DR1503: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: TaqDRAFT_4258: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: TTC1917: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
| DR1502 |
|
|
Gene: DR1502: hypothetical protein |
|
|
hypothetical protein |
| nuoE |
Gene: Deide_05130: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Dgeo_0913: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: DR1501: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: TaqDRAFT_4259: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: TTC1916: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
| nuoF |
Gene: Deide_05140: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Dgeo_0914: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: DR1500: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: TaqDRAFT_4260: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: TTC1915: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
| nuoG |
Gene: Deide_05150: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Dgeo_0915: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: DR1499: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: TaqDRAFT_4261: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: TTC1914: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
| nuoH |
Gene: Deide_05160: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Dgeo_0916: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: DR1498: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: TaqDRAFT_4262: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: TTC1913: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
| nuoI |
Gene: Deide_05170: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Dgeo_0917: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: DR1497: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: TaqDRAFT_4263: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: TTC1912: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
| nuoJ |
Gene: Deide_05180: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Dgeo_0918: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: DR1496: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: TaqDRAFT_4264: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: TTC1911: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
| nuoK |
Gene: Deide_05190: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Dgeo_0919: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: DR1495: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: TaqDRAFT_4265: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: TTC1910: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
| nuoL |
Gene: Deide_05200: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Dgeo_0920: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: DR1494: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: TaqDRAFT_4266: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: TTC1909: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
| nuoM |
Gene: Deide_05210: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Dgeo_0921: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: DR1493: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: TaqDRAFT_4267: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: TTC1908: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
| nuoN |
Gene: Deide_05220: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Dgeo_0922: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: DR1492: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
|
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NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
| CRON 3. | ||||||
| ndh |
*
Deinococcus deserti VCD115 Site: position = -29 score = 5.81968 sequence = TCGTGAATTCGTTCACAG Gene: Deide_06790: NADH dehydrogenase (EC 1.6.99.3) |
*
Deinococcus geothermalis DSM 11300 Site: position = -28 score = 5.71423 sequence = TCGTGAATTCCTTCACAG Gene: Dgeo_1949: NADH dehydrogenase (EC 1.6.99.3) |
*
Deinococcus radiodurans R1 Site: position = -29 score = 5.90616 sequence = TCGTGAATACTTTCACAG Gene: DR0950: NADH dehydrogenase (EC 1.6.99.3) |
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NADH dehydrogenase (EC 1.6.99.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |