Regulog L21_leader - Streptococcaceae
Regulator type: | RNA regulatory element |
Name: | L21_leader |
RFAM: | RF00559 |
Regulation mode: | |
Biological process: | Ribosome biogenesis |
Effector: | |
Phylum: | Firmicutes |

Member of regulog collections
- By taxonomy - Streptococcaceae
- By RNA motif - L21_leader
- By pathway - Ribosome biogenesis
Genes | Function | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CRON 1. | ||||||||||||||||
rplU |
*
Streptococcus pneumoniae TIGR4 Site: position = -122 score = 43.26 sequence = ATCCTGTGCAACCGC... Gene: SP_1105: LSU ribosomal protein L21p |
*
Streptococcus gallolyticus UCN34 Site: position = -111 score = 51.78 sequence = ACATCCTGTGCAACC... Gene: GALLO_1343: LSU ribosomal protein L21p |
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -108 score = 52.03 sequence = ATCCTGTGCAACCGC... Gene: SDEG_0786: LSU ribosomal protein L21p |
*
Streptococcus suis 05ZYH33 Site: position = -48 score = 42.64 sequence = ATCCTGTGCAACCGC... Gene: SSU05_0781: LSU ribosomal protein L21p |
*
Lactococcus lactis subsp. lactis Il1403 Site: position = -112 score = 43.03 sequence = ATAAAGTGCAACCGC... Gene: L0417: LSU ribosomal protein L21p |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -112 score = 42.71 sequence = ATAAAGTGCAACCGC... Gene: LACR_1180: LSU ribosomal protein L21p |
*
Streptococcus uberis 0140J Site: position = -104 score = 49.52 sequence = ATCCTGTGCAACCGC... Gene: SUB0725: LSU ribosomal protein L21p |
*
Streptococcus agalactiae 2603V/R Site: position = -115 score = 48.27 sequence = ACATCCTGTGCAACC... Gene: SAG1370: LSU ribosomal protein L21p |
*
Streptococcus sanguinis SK36 Site: position = -121 score = 40.95 sequence = TTCCTGTGCAACCGC... Gene: SSA_1061: LSU ribosomal protein L21p |
*
Streptococcus pyogenes M1 GAS Site: position = -108 score = 50.13 sequence = ATCCTGTGCAACCGC... Gene: SPy0819: LSU ribosomal protein L21p |
*
Streptococcus mutans UA159 Site: position = -109 score = 52.64 sequence = ATCCTGTGCAACCGC... Gene: SMU.846: LSU ribosomal protein L21p |
*
Streptococcus thermophilus CNRZ1066 Site: position = -116 score = 47.4 sequence = GTCCTGTGCAACCGC... Gene: str0417: LSU ribosomal protein L21p |
*
Streptococcus gordonii str. Challis substr. CH1 Site: position = -124 score = 41.51 sequence = TTCCTGTGCAACCGC... Gene: SGO_0818: LSU ribosomal protein L21p |
*
Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -109 score = 53.22 sequence = ACGTCCTGTGCAACC... Gene: Sez_1135: LSU ribosomal protein L21p |
*
Streptococcus mitis B6 Site: position = -123 score = 43.26 sequence = ATCCTGTGCAACCGC... Gene: smi_0926: LSU ribosomal protein L21p |
LSU ribosomal protein L21p |
ysxB |
Gene: SP_1106: FIG139598: Potential ribosomal protein |
Gene: GALLO_1342: putative ribosome-associated protein |
Gene: SDEG_0787: hypothetical ribosome-associated protein |
|
Gene: L90693: FIG139598: Potential ribosomal protein |
Gene: LACR_1181: FIG139598: Potential ribosomal protein |
Gene: SUB0726: hypothetical protein |
Gene: SAG1369: FIG139598: Potential ribosomal protein |
|
Gene: SPy0821: FIG139598: Potential ribosomal protein |
Gene: SMU.848: FIG139598: Potential ribosomal protein |
|
Gene: SGO_0819: FIG139598: Potential ribosomal protein |
Gene: Sez_1134: FIG139598: Potential ribosomal protein |
Gene: smi_0927: hypothetical protein |
FIG139598: Potential ribosomal protein |
rpmA |
Gene: SP_1107: LSU ribosomal protein L27p |
Gene: GALLO_1341: LSU ribosomal protein L27p |
Gene: SDEG_0788: LSU ribosomal protein L27p |
Gene: SSU05_0782: LSU ribosomal protein L27p |
Gene: L0421: LSU ribosomal protein L27p |
Gene: LACR_1182: LSU ribosomal protein L27p |
Gene: SUB0727: LSU ribosomal protein L27p |
Gene: SAG1368: LSU ribosomal protein L27p |
Gene: SSA_1062: LSU ribosomal protein L27p |
Gene: SPy0822: LSU ribosomal protein L27p |
Gene: SMU.849: LSU ribosomal protein L27p |
Gene: str0418: LSU ribosomal protein L27p |
Gene: SGO_0820: LSU ribosomal protein L27p |
Gene: Sez_1133: LSU ribosomal protein L27p |
Gene: smi_0928: LSU ribosomal protein L27p |
LSU ribosomal protein L27p |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |