Orthologous regulated operons containing rpmA gene

Properties
Regulator type:	RNA regulatory element
Name:	L21_leader
RFAM:	RF00559
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Lactococcus lactis subsp. cremoris SK11
Position: -112 Score: 42.71 Sequence: ATAAAGTGCAACCGC... Locus tag: LACR_1180 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: LACR_1181 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: LACR_1182 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-112	42.7	ATAAAGTGCAACCGC...	LACR_1180
Lactococcus lactis subsp. lactis Il1403
Position: -112 Score: 43.03 Sequence: ATAAAGTGCAACCGC... Locus tag: L0417 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: L90693 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: L0421 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-112	43	ATAAAGTGCAACCGC...	L0417
Streptococcus agalactiae 2603V/R
Position: -115 Score: 48.27 Sequence: ACATCCTGTGCAACC... Locus tag: SAG1370 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: SAG1369 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: SAG1368 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-115	48.3	ACATCCTGTGCAACC...	SAG1370
Streptococcus equi subsp. zooepidemicus MGCS10565
Position: -109 Score: 53.22 Sequence: ACGTCCTGTGCAACC... Locus tag: Sez_1135 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: Sez_1134 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: Sez_1133 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-109	53.2	ACGTCCTGTGCAACC...	Sez_1135
Streptococcus gallolyticus UCN34
Position: -111 Score: 51.78 Sequence: ACATCCTGTGCAACC... Locus tag: GALLO_1343 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: GALLO_1342 Name: ysxB Funciton: putative ribosome-associated protein Locus tag: GALLO_1341 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-111	51.8	ACATCCTGTGCAACC...	GALLO_1343
Streptococcus gordonii str. Challis substr. CH1
Position: -124 Score: 41.51 Sequence: TTCCTGTGCAACCGC... Locus tag: SGO_0818 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: SGO_0819 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: SGO_0820 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-124	41.5	TTCCTGTGCAACCGC...	SGO_0818
Streptococcus mitis B6
Position: -123 Score: 43.26 Sequence: ATCCTGTGCAACCGC... Locus tag: smi_0926 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: smi_0927 Name: ysxB Funciton: hypothetical protein Locus tag: smi_0928 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-123	43.3	ATCCTGTGCAACCGC...	smi_0926
Streptococcus pneumoniae TIGR4
Position: -122 Score: 43.26 Sequence: ATCCTGTGCAACCGC... Locus tag: SP_1105 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: SP_1106 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: SP_1107 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-122	43.3	ATCCTGTGCAACCGC...	SP_1105
Streptococcus pyogenes M1 GAS
Position: -108 Score: 50.13 Sequence: ATCCTGTGCAACCGC... Locus tag: SPy0819 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: SPy0821 Name: ysxB Funciton: FIG139598: Potential ribosomal protein Locus tag: SPy0822 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-108	50.1	ATCCTGTGCAACCGC...	SPy0819
Streptococcus suis 05ZYH33
Position: -48 Score: 42.64 Sequence: ATCCTGTGCAACCGC... Locus tag: SSU05_0781 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: SSU05_0782 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-rpmA	-48	42.6	ATCCTGTGCAACCGC...	SSU05_0781
Streptococcus thermophilus CNRZ1066
Position: -116 Score: 47.4 Sequence: GTCCTGTGCAACCGC... Locus tag: str0417 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: str0418 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-rpmA	-116	47.4	GTCCTGTGCAACCGC...	str0417
Streptococcus uberis 0140J
Position: -104 Score: 49.52 Sequence: ATCCTGTGCAACCGC... Locus tag: SUB0725 Name: rplU Funciton: LSU ribosomal protein L21p Locus tag: SUB0726 Name: ysxB Funciton: hypothetical protein Locus tag: SUB0727 Name: rpmA Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA	-104	49.5	ATCCTGTGCAACCGC...	SUB0725

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing rpmA gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --