Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rplU gene

Properties
Regulator type: RNA regulatory element
Name: L21_leader
RFAM: RF00559
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactococcus lactis subsp. cremoris SK11
Position: -112
Score: 42.71
Sequence: ATAAAGTGCAACCGC...
Locus tag: LACR_1180
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: LACR_1181
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: LACR_1182
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -112 42.7 ATAAAGTGCAACCGC... LACR_1180
Lactococcus lactis subsp. lactis Il1403
Position: -112
Score: 43.03
Sequence: ATAAAGTGCAACCGC...
Locus tag: L0417
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: L90693
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: L0421
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -112 43 ATAAAGTGCAACCGC... L0417
Streptococcus agalactiae 2603V/R
Position: -115
Score: 48.27
Sequence: ACATCCTGTGCAACC...
Locus tag: SAG1370
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SAG1369
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SAG1368
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -115 48.3 ACATCCTGTGCAACC... SAG1370
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Position: -108
Score: 52.03
Sequence: ATCCTGTGCAACCGC...
Locus tag: SDEG_0786
Name: rplU
Funciton: LSU ribosomal protein L21p
rplU -108 52 ATCCTGTGCAACCGC... SDEG_0786
Streptococcus equi subsp. zooepidemicus MGCS10565
Position: -109
Score: 53.22
Sequence: ACGTCCTGTGCAACC...
Locus tag: Sez_1135
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: Sez_1134
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: Sez_1133
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -109 53.2 ACGTCCTGTGCAACC... Sez_1135
Streptococcus gallolyticus UCN34
Position: -111
Score: 51.78
Sequence: ACATCCTGTGCAACC...
Locus tag: GALLO_1343
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: GALLO_1342
Name: ysxB
Funciton: putative ribosome-associated protein
Locus tag: GALLO_1341
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -111 51.8 ACATCCTGTGCAACC... GALLO_1343
Streptococcus gordonii str. Challis substr. CH1
Position: -124
Score: 41.51
Sequence: TTCCTGTGCAACCGC...
Locus tag: SGO_0818
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SGO_0819
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SGO_0820
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -124 41.5 TTCCTGTGCAACCGC... SGO_0818
Streptococcus mitis B6
Position: -123
Score: 43.26
Sequence: ATCCTGTGCAACCGC...
Locus tag: smi_0926
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: smi_0927
Name: ysxB
Funciton: hypothetical protein
Locus tag: smi_0928
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -123 43.3 ATCCTGTGCAACCGC... smi_0926
Streptococcus mutans UA159
Position: -109
Score: 52.64
Sequence: ATCCTGTGCAACCGC...
Locus tag: SMU.846
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SMU.848
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
rplU-ysxB -109 52.6 ATCCTGTGCAACCGC... SMU.846
Streptococcus pneumoniae TIGR4
Position: -122
Score: 43.26
Sequence: ATCCTGTGCAACCGC...
Locus tag: SP_1105
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SP_1106
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SP_1107
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -122 43.3 ATCCTGTGCAACCGC... SP_1105
Streptococcus pyogenes M1 GAS
Position: -108
Score: 50.13
Sequence: ATCCTGTGCAACCGC...
Locus tag: SPy0819
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SPy0821
Name: ysxB
Funciton: FIG139598: Potential ribosomal protein
Locus tag: SPy0822
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -108 50.1 ATCCTGTGCAACCGC... SPy0819
Streptococcus sanguinis SK36
Position: -121
Score: 40.95
Sequence: TTCCTGTGCAACCGC...
Locus tag: SSA_1061
Name: rplU
Funciton: LSU ribosomal protein L21p
rplU -121 41 TTCCTGTGCAACCGC... SSA_1061
Streptococcus suis 05ZYH33
Position: -48
Score: 42.64
Sequence: ATCCTGTGCAACCGC...
Locus tag: SSU05_0781
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SSU05_0782
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-rpmA -48 42.6 ATCCTGTGCAACCGC... SSU05_0781
Streptococcus thermophilus CNRZ1066
Position: -116
Score: 47.4
Sequence: GTCCTGTGCAACCGC...
Locus tag: str0417
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: str0418
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-rpmA -116 47.4 GTCCTGTGCAACCGC... str0417
Streptococcus uberis 0140J
Position: -104
Score: 49.52
Sequence: ATCCTGTGCAACCGC...
Locus tag: SUB0725
Name: rplU
Funciton: LSU ribosomal protein L21p
Locus tag: SUB0726
Name: ysxB
Funciton: hypothetical protein
Locus tag: SUB0727
Name: rpmA
Funciton: LSU ribosomal protein L27p
rplU-ysxB-rpmA -104 49.5 ATCCTGTGCAACCGC... SUB0725