Regulog ArgR - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine biosynthesis; Arginine degradation |
| Effector: | Arginine |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ArgR
- By taxonomy - Vibrionales
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
- By pathway - Arginine degradation
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 15 | 7 |
| Vibrio vulnificus CMCP6 | 17 | 9 |
| Vibrio harveyi ATCC BAA-1116 | 11 | 7 |
| Vibrio parahaemolyticus RIMD 2210633 | 15 | 8 |
| Vibrio shilonii AK1 | 15 | 8 |
| Vibrio splendidus LGP32 | 15 | 8 |
| Vibrio fischeri ES114 | 7 | 5 |
| Vibrio salmonicida LFI1238 | 9 | 6 |
| Vibrio angustum S14 | 7 | 3 |
| Photobacterium profundum SS9 | 6 | 2 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| argD |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -115 score = 4.05946 sequence = AATAAATGTAAATACAAT Site: position = -195 score = 4.2722 sequence = ATTGCATAAATAGTCGTT Gene: VC2618: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Vibrio vulnificus CMCP6 Site: position = -189 score = 4.1597 sequence = GATGCATAAATAGTCATT Gene: VV1_1313: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -195 score = 3.95672 sequence = GGCGCATAAATAATCATA Gene: VIBHAR_00079: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -115 score = 3.99546 sequence = ATTAAATGTAAATACAAT Site: position = -195 score = 4.18302 sequence = GATGCATAAATACTCATA Gene: VP2797: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Vibrio shilonii AK1 Site: position = -150 score = 3.85167 sequence = AATAATTGTAAATACAAT Site: position = -345 score = 3.76098 sequence = TTTACTTATTAAATTGAA Gene: VSAK1_09328: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
*
Vibrio splendidus LGP32 Site: position = -114 score = 3.89911 sequence = ATTAAATGTAAATATAAT Site: position = -194 score = 4.15525 sequence = GATGCATAAATAGTCATA Gene: VS_2861: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
Gene: VF_2284: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
Gene: VSAL_I2733: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
Gene: VAS14_21307: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
Gene: PBPRA0289: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) |
| astA |
Gene: VC2617: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VV1_1314: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VIBHAR_00078: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VP2796: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VSAK1_09323: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VS_2860: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VF_2283: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VSAL_I2734: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: VAS14_21302: Arginine N-succinyltransferase (EC 2.3.1.109) |
Gene: PBPRA0290: Arginine N-succinyltransferase (EC 2.3.1.109) |
Arginine N-succinyltransferase (EC 2.3.1.109) |
| astD |
Gene: VC2616: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VV1_1315: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VIBHAR_00077: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VP2795: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VSAK1_09318: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VS_2859: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VF_2282: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VSAL_I2735: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: VAS14_21297: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Gene: PBPRA0291: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
| CRON 2. | |||||||||||
| argF |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -77 score = 4.47622 sequence = TTAAAATATTTATTCACT Site: position = -83 score = 3.81449 sequence = TTTAATTTAAAATATTTA Site: position = -84 score = 3.38014 sequence = ATTTAATTTAAAATATTT Site: position = -56 score = 3.70782 sequence = ATAGCATTTTCATGCTTT Gene: VC2508: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio vulnificus CMCP6 Site: position = -76 score = 4.44946 sequence = TTAAAATAATTATTCACA Site: position = -97 score = 3.51437 sequence = TTGGCTTTTTTATGCTTA Gene: VV1_1466: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -62 score = 4.33023 sequence = AAAGCATTTATATGTTTT Site: position = -83 score = 3.9382 sequence = TAAAAATAATCATTCACA Site: position = -44 score = 3.42842 sequence = AATGCTTTTATTCTTTAT Gene: VIBHAR_03645: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -53 score = 3.40174 sequence = TATATGTTTTAATACAAT Site: position = -61 score = 3.90063 sequence = GAAGCATTTATATGTTTT Site: position = -82 score = 4.44946 sequence = TTAAAATAATTATTCACA Gene: VP2653: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio shilonii AK1 Site: position = -53 score = 4.59481 sequence = AAAGAATTTTTATGTATA Site: position = -74 score = 3.64941 sequence = TCAAAATACTTATTCACA Site: position = -43 score = 3.67353 sequence = TATGTATAAATAAACCAA Site: position = -80 score = 3.744 sequence = ATTAAATCAAAATACTTA Site: position = -126 score = 3.76128 sequence = TAAACATAATTATTTATC Site: position = -134 score = 3.57521 sequence = ATGGCATTTAAACATAAT Gene: VSAK1_02029: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio splendidus LGP32 Site: position = -29 score = 3.43892 sequence = ATTGATTCTATATACCCA Site: position = -80 score = 4.38985 sequence = ACAAAATAAATATTCACA Site: position = -59 score = 3.75269 sequence = GTAGCATTTTTATGTTTA Gene: VS_2739: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio fischeri ES114 Site: position = -58 score = 4.74478 sequence = AATGAATTTTTATGTATA Site: position = -79 score = 4.25163 sequence = TCAAAATAAATATTCACA Site: position = -85 score = 3.45744 sequence = AATAAATCAAAATAAATA Site: position = -104 score = 3.62463 sequence = AAAAAACATATACACATT Gene: VF_0407: Ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Vibrio salmonicida LFI1238 Site: position = -85 score = 3.53363 sequence = AAAACAATAAAATATATA Site: position = -83 score = 3.52268 sequence = AACAATAAAATATATATT Site: position = -79 score = 4.68948 sequence = ATAAAATATATATTCACA Site: position = -58 score = 4.47575 sequence = AATGCATTTATATGTTTA Gene: VSAL_I0520: Ornithine carbamoyltransferase (EC 2.1.3.3) |
|
|
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| CRON 3. | |||||||||||
| carA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -47 score = 3.7934 sequence = TTTGCAAAATAATTTATT Gene: VC2390: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Vibrio vulnificus CMCP6 Site: position = -36 score = 3.98218 sequence = ATTTATTTTTTATGCATT Gene: VV1_0566: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: VIBHAR_00912: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: VP0470: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: VSAK1_13907: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Vibrio splendidus LGP32 Site: position = -37 score = 4.15763 sequence = AATCAATTTTAATGCATT Gene: VS_0461: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: VF_0472: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Vibrio salmonicida LFI1238 Site: position = -51 score = 3.88672 sequence = TTTGCATTTTTATGTATG Gene: VSAL_I0585: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Vibrio angustum S14 Site: position = -29 score = 4.42707 sequence = ATTGCATTTTTATTTTAT Gene: VAS14_07409: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Photobacterium profundum SS9 Site: position = -28 score = 4.42707 sequence = ATTGCATTTTTATTTTTT Gene: PBPRA0596: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
| carB |
Gene: VC2389: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VV1_0565: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VIBHAR_00913: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VP0471: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VSAK1_13912: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VS_0462: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VF_0473: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VSAL_I0586: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: VAS14_07404: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: PBPRA0597: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
| CRON 4. | |||||||||||
| argA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -20 score = 4.46678 sequence = AAAGAATAAAAAGTCATT Gene: VC2316: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio vulnificus CMCP6 Site: position = -31 score = 3.95532 sequence = TCAGCATAAATAGTCACA Site: position = -52 score = 4.05038 sequence = AGAGAATAAAAAGACAAT Gene: VV1_1799: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -22 score = 4.47288 sequence = AAAGCATAAATAAACACA Site: position = -43 score = 3.94163 sequence = ATTGAATAAGAAGACAAT Gene: VIBHAR_03295: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -31 score = 4.33466 sequence = TAAGCATAAATAAACACA Site: position = -52 score = 4.35381 sequence = ATTGAATAAAAAGACATT Gene: VP2371: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio shilonii AK1 Site: position = -128 score = 4.27542 sequence = ACTGAATAAAAAGTCATT Gene: VSAK1_08616: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio splendidus LGP32 Site: position = -31 score = 3.9326 sequence = ATCGAATAAATAAACAAG Site: position = -52 score = 4.39734 sequence = TTTGAATTTAAATGCTAA Gene: VS_0678: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio fischeri ES114 Site: position = -32 score = 3.77095 sequence = AGTGAATAAGTATTTATC Site: position = -53 score = 4.20863 sequence = TTAAAATAAATAGTCACA Gene: VF_0585: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio salmonicida LFI1238 Site: position = -23 score = 4.7299 sequence = AATGCATAAATAATTATT Gene: VSAL_I0685: N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio angustum S14 Site: position = -195 score = 3.88399 sequence = TGTTAATTTAAAATCATA Gene: VAS14_20806: N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: PBPRA2996: N-acetylglutamate synthase (EC 2.3.1.1) |
N-acetylglutamate synthase (EC 2.3.1.1) |
| CRON 5. | |||||||||||
| argE |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -84 score = 4.31771 sequence = ATTGTTTTTTTATTCACT Site: position = -63 score = 4.12808 sequence = AGTGATTTAATATGTGTT Gene: VC2645: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio vulnificus CMCP6 Site: position = -63 score = 3.80868 sequence = TATGAGTTAATATGTGTT Site: position = -84 score = 4.66415 sequence = ATTGATTTTTTATTCATT Gene: VV1_1370: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -63 score = 4.20732 sequence = TATGATTTAATATGTGTT Site: position = -84 score = 4.52593 sequence = TTTGATTTTTTATTCATT Gene: VIBHAR_00044: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -63 score = 3.80868 sequence = TATGAGTTAATATGTGTT Site: position = -84 score = 4.52593 sequence = TTTGATTTTTTATTCATT Gene: VP2760: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio shilonii AK1 Site: position = -63 score = 4.14331 sequence = TTTGATTTAATATGTGTT Site: position = -84 score = 4.66415 sequence = ATTGATTTTTTATTCATT Gene: VSAK1_09448: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio splendidus LGP32 Site: position = -63 score = 4.20732 sequence = TATGATTTAATATGTGTT Site: position = -84 score = 3.89054 sequence = TTTGATTTCTTATGCATT Gene: VS_2889: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio fischeri ES114 Site: position = -62 score = 3.98986 sequence = TGTGATTTAATATGTGTT Site: position = -83 score = 4.5255 sequence = ATTGTATTTTTATTCACT Gene: VF_2307: Acetylornithine deacetylase (EC 3.5.1.16) |
*
Vibrio salmonicida LFI1238 Site: position = -83 score = 3.76307 sequence = ACTGTATTTCTATTCACT Site: position = -62 score = 3.98986 sequence = TGTGATTTAATATGTGTT Gene: VSAL_I2755: Acetylornithine deacetylase (EC 3.5.1.16) |
|
|
Acetylornithine deacetylase (EC 3.5.1.16) |
| CRON 6. | |||||||||||
| artP |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -63 score = 4.29723 sequence = ATTGCATAAAAATACGTT Gene: VCA0760: Arginine ABC transporter, ATP-binding protein |
*
Vibrio vulnificus CMCP6 Site: position = -83 score = 4.24785 sequence = ACTAAATTTTTATACATT Gene: VV20815: Arginine ABC transporter, ATP-binding protein |
Gene: VIBHAR_05528: Arginine ABC transporter, ATP-binding protein |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -63 score = 3.86825 sequence = ATTGCATAAAAACTCCTT Site: position = -84 score = 4.52518 sequence = ATTAAATTTTTATACATT Gene: VPA0636: Arginine ABC transporter, ATP-binding protein |
*
Vibrio shilonii AK1 Site: position = -26 score = 4.06896 sequence = AATGATTTTTAATGCAGT Site: position = -84 score = 4.23698 sequence = TTAAAATTTTTATACATT Gene: VSAK1_21964: Arginine ABC transporter, ATP-binding protein |
Gene: VS_1564: Arginine ABC transporter, ATP-binding protein |
|
|
Gene: VAS14_04153: Arginine ABC transporter, ATP-binding protein |
Gene: PBPRA2073: Arginine ABC transporter, ATP-binding protein |
Arginine ABC transporter, ATP-binding protein |
| artI |
Gene: VCA0759: Arginine ABC transporter, substrate-binding protein |
Gene: VV20816: Arginine ABC transporter, substrate-binding protein |
Gene: VIBHAR_05529: Arginine ABC transporter, substrate-binding protein |
Gene: VPA0637: Arginine ABC transporter, substrate-binding protein |
Gene: VSAK1_21959: Arginine ABC transporter, substrate-binding protein |
Gene: VS_1563: Arginine ABC transporter, substrate-binding protein |
|
|
Gene: VAS14_04158: Arginine ABC transporter, substrate-binding protein |
Gene: PBPRA2074: Arginine ABC transporter, substrate-binding protein |
Arginine ABC transporter, substrate-binding protein |
| artQ |
Gene: VCA0758: Arginine ABC transporter, permease protein 1 |
Gene: VV20817: Arginine ABC transporter, permease protein 1 |
Gene: VIBHAR_05530: Arginine ABC transporter, permease protein 1 |
Gene: VPA0638: Arginine ABC transporter, permease protein 1 |
Gene: VSAK1_21954: Arginine ABC transporter, permease protein 1 |
Gene: VS_1562: Arginine ABC transporter, permease protein 1 |
|
|
Gene: VAS14_04163: Arginine ABC transporter, permease protein 1 |
Gene: PBPRA2075: Arginine ABC transporter, permease protein 1 |
Arginine ABC transporter, permease protein 1 |
| artM |
Gene: VCA0757: Arginine ABC transporter, permease protein 2 |
Gene: VV20818: Arginine ABC transporter, permease protein 2 |
Gene: VIBHAR_05531: Arginine ABC transporter, permease protein 2 |
Gene: VPA0639: Arginine ABC transporter, permease protein 2 |
Gene: VSAK1_21949: Arginine ABC transporter, permease protein 2 |
Gene: VS_1561: Arginine ABC transporter, permease protein 2 |
|
|
Gene: VAS14_04168: Arginine ABC transporter, permease protein 2 |
Gene: PBPRA2076: Arginine ABC transporter, permease protein 2 |
Arginine ABC transporter, permease protein 2 |
| CRON 7. | |||||||||||
| arcA |
Gene: VC0423: Arginine deiminase (EC 3.5.3.6) |
*
Vibrio vulnificus CMCP6 Site: position = -250 score = 4.11501 sequence = TTTGAATAAAAAATCACG Site: position = -194 score = 4.37365 sequence = TACGCATAAAAAATCAAT Gene: VV1_1467: Arginine deiminase (EC 3.5.3.6) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -194 score = 4.40419 sequence = AAAGAATAAAAACGCACT Gene: VIBHAR_03644: Arginine deiminase (EC 3.5.3.6) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -193 score = 4.40419 sequence = AAAGAATAAAAACGCATT Site: position = -251 score = 3.96733 sequence = TTAGAATAGAAATGCACA Gene: VP2652: Arginine deiminase (EC 3.5.3.6) |
*2
Vibrio shilonii AK1 Site: position = -248 score = 3.93064 sequence = TACGTTTTTTTATGCACA Gene: VSAK1_02034: Arginine deiminase (EC 3.5.3.6) Gene: VSAK1_20559: Arginine deiminase (EC 3.5.3.6) |
*
Vibrio splendidus LGP32 Site: position = -85 score = 3.77062 sequence = ATAAAATAATTCATTATT Site: position = -57 score = 4.28439 sequence = AATAAATAATTACTCTTA Gene: VS_2924: Arginine deiminase (EC 3.5.3.6) |
|
|
|
Gene: PBPRA0477: Arginine deiminase (EC 3.5.3.6) |
Arginine deiminase (EC 3.5.3.6) |
| arcC |
|
|
|
|
Gene: VSAK1_20564: Carbamate kinase (EC 2.7.2.2) |
Gene: VS_2925: Carbamate kinase (EC 2.7.2.2) |
|
|
|
Gene: PBPRA0476: Carbamate kinase (EC 2.7.2.2) |
Carbamate kinase (EC 2.7.2.2) |
| arcB |
|
|
|
|
Gene: VSAK1_20569: Ornithine carbamoyltransferase (EC 2.1.3.3), catabolic |
Gene: VS_2926: Ornithine carbamoyltransferase (EC 2.1.3.3), catabolic |
|
|
|
Gene: PBPRA0475: Ornithine carbamoyltransferase (EC 2.1.3.3), catabolic |
Ornithine carbamoyltransferase (EC 2.1.3.3), catabolic |
| CRON 8. | |||||||||||
| argC |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -110 score = 4.30686 sequence = AACACATATTAAATCACT Site: position = -89 score = 4.43731 sequence = AGTGAATAAAAAAACAAT Gene: VC2644: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio vulnificus CMCP6 Site: position = -82 score = 4.85371 sequence = AATGAATAAAAAATCAAT Site: position = -103 score = 4.09322 sequence = AACACATATTAACTCATA Gene: VV1_1371: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -99 score = 4.30241 sequence = AACACATATTAAATCATA Site: position = -78 score = 4.84926 sequence = AATGAATAAAAAATCAAA Gene: VIBHAR_00043: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -78 score = 4.84926 sequence = AATGAATAAAAAATCAAA Site: position = -99 score = 4.09322 sequence = AACACATATTAACTCATA Gene: VP2759: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio shilonii AK1 Site: position = -115 score = 4.85371 sequence = AATGAATAAAAAATCAAT Site: position = -136 score = 4.30241 sequence = AACACATATTAAATCAAA Gene: VSAK1_09443: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio splendidus LGP32 Site: position = -108 score = 4.30241 sequence = AACACATATTAAATCATA Site: position = -87 score = 4.31327 sequence = AATGCATAAGAAATCAAA Gene: VS_2888: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio fischeri ES114 Site: position = -143 score = 4.52068 sequence = AGTGAATAAAAATACAAT Site: position = -164 score = 4.30241 sequence = AACACATATTAAATCACA Gene: VF_2306: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio salmonicida LFI1238 Site: position = -162 score = 4.30241 sequence = AACACATATTAAATCACA Site: position = -106 score = 4.00635 sequence = AATAAACTAAAATTTAAA Gene: VSAL_I2756: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Vibrio angustum S14 Site: position = -295 score = 3.77271 sequence = TAAACATATAAATGCAAC Site: position = -274 score = 3.66129 sequence = AACGAATAATTTATTGCT Gene: VAS14_21422: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Photobacterium profundum SS9 Site: position = -39 score = 3.84848 sequence = AAAGCTTTAACAATCAAA Site: position = -260 score = 3.84313 sequence = TAAACATATTAATTCAGA Gene: PBPRA0266: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| argB |
Gene: VC2643: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VV1_1372: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VIBHAR_00042: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VP2758: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VSAK1_09438: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VS_2887: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VF_2305: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VSAL_I2757: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: VAS14_21417: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: PBPRA0267: Acetylglutamate kinase (EC 2.7.2.8) |
Acetylglutamate kinase (EC 2.7.2.8) |
| argG |
Gene: VC2642: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VV1_1373: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VIBHAR_00041: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VP2757: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VSAK1_09433: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VS_2886: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VF_2304: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VSAL_I2758: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: VAS14_21412: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: PBPRA0268: Argininosuccinate synthase (EC 6.3.4.5) |
Argininosuccinate synthase (EC 6.3.4.5) |
| argH |
Gene: VC2641: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio vulnificus CMCP6 Site: position = -137 score = 4.40182 sequence = AATGAATTTATACTTTAT Site: position = -158 score = 4.35404 sequence = CATGAATAAATATGTAAA Gene: VV1_1374: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -158 score = 4.35404 sequence = CATGAATAAATATGTAAA Site: position = -137 score = 3.77323 sequence = ATTGAATTTCTACTTTAT Gene: VIBHAR_00040: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -155 score = 4.21751 sequence = GGTGAATATATATGTAAA Site: position = -134 score = 4.33782 sequence = ATTGAATTTATACTTTAT Gene: VP2756: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio shilonii AK1 Site: position = -149 score = 4.32233 sequence = AATGAATTTTTACTTTAT Site: position = -170 score = 4.32975 sequence = TTTGAATATTTATGTGAA Gene: VSAK1_09423: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio splendidus LGP32 Site: position = -124 score = 4.37952 sequence = AATGAATTAATACTTTAT Site: position = -145 score = 3.94211 sequence = GGTGAATAAATATGTGAA Gene: VS_2885: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*
Vibrio fischeri ES114 Site: position = -114 score = 3.68053 sequence = AATGAATTTTTTCTTTAT Site: position = -135 score = 4.64004 sequence = TTTGAATAAATATGTAAA Gene: VF_2303: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
*2
Vibrio salmonicida LFI1238 Site: position = -147 score = 4.77826 sequence = ATTGAATAAATATGTAAA Gene: VSAL_I2710: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) Gene: VSAL_I0684: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: VAS14_21407: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: PBPRA0269: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |