Regulon of ArgR in Vibrio parahaemolyticus RIMD 2210633
| Regulator type: | Transcription factor |
| TF locus tag: | VP0324 |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine biosynthesis; Arginine degradation |
| Effector: | Arginine |
| Regulog: | ArgR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ArgR
- By taxonomy - Vibrionales
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
- By pathway - Arginine degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -82
Score: 4.4 Sequence: TTAAAATAATTATTCACA
Position: -61
Score: 3.9 Sequence: GAAGCATTTATATGTTTT
Position: -53
Score: 3.4 Sequence: TATATGTTTTAATACAAT
Locus tag: VP2653
Name: argF Funciton: Ornithine carbamoyltransferase (EC 2.1.3.3) |
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argF
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Ornithine carbamoyltransferase (EC 2.1.3.3)
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Position: -251
Score: 4 Sequence: TTAGAATAGAAATGCACA
Position: -193
Score: 4.4 Sequence: AAAGAATAAAAACGCATT
Locus tag: VP2652
Name: arcA Funciton: Arginine deiminase (EC 3.5.3.6) |
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arcA
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Arginine deiminase (EC 3.5.3.6)
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Position: -84
Score: 4.5 Sequence: ATTAAATTTTTATACATT
Position: -63
Score: 3.9 Sequence: ATTGCATAAAAACTCCTT
Locus tag: VPA0636
Name: artP Funciton: Arginine ABC transporter, ATP-binding protein
Locus tag: VPA0637
Name: artI Funciton: Arginine ABC transporter, substrate-binding protein
Locus tag: VPA0638
Name: artQ Funciton: Arginine ABC transporter, permease protein 1
Locus tag: VPA0639
Name: artM Funciton: Arginine ABC transporter, permease protein 2 |
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artP
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Arginine ABC transporter, ATP-binding protein
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artI
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Arginine ABC transporter, substrate-binding protein
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artQ
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Arginine ABC transporter, permease protein 1
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artM
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Arginine ABC transporter, permease protein 2
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Position: -155
Score: 4.2 Sequence: GGTGAATATATATGTAAA
Position: -134
Score: 4.3 Sequence: ATTGAATTTATACTTTAT
Locus tag: VP2756
Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1) |
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argH
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Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)
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Position: -99
Score: 4.1 Sequence: AACACATATTAACTCATA
Position: -78
Score: 4.8 Sequence: AATGAATAAAAAATCAAA
Locus tag: VP2759
Name: argC Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Locus tag: VP2758
Name: argB Funciton: Acetylglutamate kinase (EC 2.7.2.8)
Locus tag: VP2757
Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5) |
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argC
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N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
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argB
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Acetylglutamate kinase (EC 2.7.2.8)
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argG
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Argininosuccinate synthase (EC 6.3.4.5)
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Position: -84
Score: 4.5 Sequence: TTTGATTTTTTATTCATT
Position: -63
Score: 3.8 Sequence: TATGAGTTAATATGTGTT
Locus tag: VP2760
Name: argE Funciton: Acetylornithine deacetylase (EC 3.5.1.16) |
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argE
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Acetylornithine deacetylase (EC 3.5.1.16)
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Position: -195
Score: 4.2 Sequence: GATGCATAAATACTCATA
Position: -115
Score: 4 Sequence: ATTAAATGTAAATACAAT
Locus tag: VP2797
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: VP2796
Name: astA Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: VP2795
Name: astD Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) |
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argD
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Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
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astA
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Arginine N-succinyltransferase (EC 2.3.1.109)
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astD
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Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
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Position: -52
Score: 4.4 Sequence: ATTGAATAAAAAGACATT
Position: -31
Score: 4.3 Sequence: TAAGCATAAATAAACACA
Locus tag: VP2371
Name: argA Funciton: N-acetylglutamate synthase (EC 2.3.1.1) |
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argA
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N-acetylglutamate synthase (EC 2.3.1.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |