Regulog ModE - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | ModE |
| Regulation mode: | repressor (activator) |
| Biological process: | Molybdenum homeostasis |
| Effector: | Molybdate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ModE
- By taxonomy - Vibrionales
- By TF family - ModE
- By effector - Molybdate
- By pathway - Molybdenum homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | ||
| Vibrio vulnificus CMCP6 | ||
| Vibrio harveyi ATCC BAA-1116 | ||
| Vibrio parahaemolyticus RIMD 2210633 | ||
| Vibrio shilonii AK1 | ||
| Vibrio splendidus LGP32 | ||
| Vibrio fischeri ES114 | ||
| Vibrio salmonicida LFI1238 | ||
| Vibrio angustum S14 | 3 | 1 |
| Photobacterium profundum SS9 | 3 | 1 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| modA |
Gene: VCA0726: Molybdate ABC transporter, substrate-binding protein |
Gene: VV20329: Molybdate ABC transporter, substrate-binding protein |
Gene: VIBHAR_05725: Molybdate ABC transporter, substrate-binding protein |
Gene: VPA0931: Molybdate ABC transporter, substrate-binding protein |
Gene: VSAK1_14847: Molybdate ABC transporter, substrate-binding protein |
Gene: VS_II0723: Molybdate ABC transporter, substrate-binding protein |
Gene: VF_A0290: Molybdate ABC transporter, substrate-binding protein |
Gene: VSAL_II0782: Molybdate ABC transporter, substrate-binding protein |
*
Vibrio angustum S14 Site: position = -43 score = 7.64432 sequence = CGATATGTAGTTTACTATATATCG Gene: VAS14_11339: Molybdate ABC transporter, substrate-binding protein |
*
Photobacterium profundum SS9 Site: position = -50 score = 7.32705 sequence = CGATATGTAGTAAGGTATATATCG Gene: PBPRB1349: Molybdate ABC transporter, substrate-binding protein |
Molybdate ABC transporter, substrate-binding protein |
| modB |
Gene: VCA0725: Molybdate ABC transporter, permease protein |
Gene: VV20328: Molybdate ABC transporter, permease protein |
Gene: VIBHAR_05726: Molybdate ABC transporter, permease protein |
Gene: VPA0930: Molybdate ABC transporter, permease protein |
Gene: VSAK1_14842: Molybdate ABC transporter, permease protein |
Gene: VS_II0724: Molybdate ABC transporter, permease protein |
Gene: VF_A0291: Molybdate ABC transporter, permease protein |
Gene: VSAL_II0781: Molybdate ABC transporter, permease protein |
Gene: VAS14_11344: Molybdate ABC transporter, permease protein |
Gene: PBPRB1348: Molybdate ABC transporter, permease protein |
Molybdate ABC transporter, permease protein |
| modC |
Gene: VCA0724: Molybdate ABC transporter, ATP-binding protein |
Gene: VV20327: Molybdate ABC transporter, ATP-binding protein |
Gene: VIBHAR_05727: Molybdate ABC transporter, ATP-binding protein |
Gene: VPA0929: Molybdate ABC transporter, ATP-binding protein |
Gene: VSAK1_14837: Molybdate ABC transporter, ATP-binding protein |
Gene: VS_II0725: Molybdate ABC transporter, ATP-binding protein |
Gene: VF_A0292: Molybdate ABC transporter, ATP-binding protein |
Gene: VSAL_II0780: Molybdate ABC transporter, ATP-binding protein |
Gene: VAS14_11349: Molybdate ABC transporter, ATP-binding protein |
Gene: PBPRB1347: Molybdate ABC transporter, ATP-binding protein |
Molybdate ABC transporter, ATP-binding protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |