Regulog TyrR - Psychromonadaceae/Aeromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	TyrR
Regulation mode:	activator (repressor)
Biological process:	Aromatic amino acid metabolism
Effector:	Tyrosine; Phenylalanine
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By trascription factor - TyrR
By taxonomy - Psychromonadaceae/Aeromonadales
By TF family - TyrR
By effector - Tyrosine
By effector - Phenylalanine
By pathway - Aromatic amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Psychromonas ingrahamii 37
Psychromonas sp. CNPT3
Moritella sp. PE36	2	2
Aeromonas hydrophila subsp. hydrophila ATCC 7966	9	4
Aeromonas salmonicida subsp. salmonicida A449	6	4
Tolumonas auensis DSM 9187	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
tyrP	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	* Moritella sp. PE36 Site: position = -78 score = 5.50476 sequence = TTGTAAACATAAGTTTACAC Site: position = -196 score = 4.60315 sequence = CTGTAAATATTAGTTTCCAA Gene: PE36_13494: Tyrosine-specific transport protein	Aeromonas hydrophila subsp. hydrophila ATCC 7966	Aeromonas salmonicida subsp. salmonicida A449	Tolumonas auensis DSM 9187	Tyrosine-specific transport protein

CRON 2.
tyrR	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	* Moritella sp. PE36 Site: position = -58 score = 4.01254 sequence = GTTGATACTGCCGTTTACAT Gene: PE36_04363: Transcriptional regulator of aromatic amino acid biosynthesis	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_1886: Transcriptional regulator of aromatic amino acid biosynthesis	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_2418: Transcriptional regulator of aromatic amino acid biosynthesis	Tolumonas auensis DSM 9187 Gene: Tola_1927: Transcriptional regulator of aromatic amino acid biosynthesis	Transcriptional regulator of aromatic amino acid biosynthesis

CRON 3.
aroF	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_04938: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) # AroA I alpha	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -59 score = 4.83986 sequence = GTGTAAATAAAAATGAACGG Site: position = -238 score = 4.51427 sequence = GCGTAATCATATGTTTACGT Gene: AHA_1654: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) # AroA I alpha	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -60 score = 5.42888 sequence = GTGTAAATAAATGAATACAC Site: position = -239 score = 5.36617 sequence = ATGTAACTATATATTTACGA Gene: ASA_2704: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) # AroA I alpha	* Tolumonas auensis DSM 9187 Site: position = -32 score = 5.55862 sequence = GTGTAAAGATAAGTTTACAG Site: position = -69 score = 4.05116 sequence = ATGTCAATACAAGATTAAAA Gene: Tola_1376: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) # AroA I alpha	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) # AroA I alpha
tyrA	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_04928: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) # AroHI/TyrAc, NAD-specific	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_1655: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) # AroHI/TyrAc, NAD-specific	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_2703: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) # AroHI/TyrAc, NAD-specific	Tolumonas auensis DSM 9187 Gene: Tola_1377: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) # AroHI/TyrAc, NAD-specific	Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) # AroHI/TyrAc, NAD-specific

CRON 4.
aroG	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -82 score = 5.68918 sequence = ATGTAATTTTCTATTTACAC Gene: AHA_1980: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -82 score = 5.68918 sequence = ATGTAATTTTCTATTTACAC Gene: ASA_1860: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)	Tolumonas auensis DSM 9187 Gene: Tola_1390: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)

CRON 5.
phhA	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_05048: Phenylalanine-4-hydroxylase (EC 1.14.16.1)	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -146 score = 5.36319 sequence = TTGTCACAAATTATTTACAA Gene: AHA_1883: Phenylalanine-4-hydroxylase (EC 1.14.16.1)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -136 score = 5.36319 sequence = TTGTCACAAATTGTTTACAA Gene: ASA_2420: Phenylalanine-4-hydroxylase (EC 1.14.16.1)	Tolumonas auensis DSM 9187	Phenylalanine-4-hydroxylase (EC 1.14.16.1)
phhB	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_05053: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_1884: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_2419: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)	Tolumonas auensis DSM 9187	Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)

CRON 6.
hpd	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_16244: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -180 score = 5.27011 sequence = ATGTCACAATCTATTTACAT Site: position = -91 score = 4.38097 sequence = ATGAAACAAGTTGTTAACAA Gene: AHA_2663: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -112 score = 4.38097 sequence = ATGAAACAAGTTGTTAACAA Site: position = -201 score = 5.27011 sequence = ATGTCACAATCTATTTACAT Gene: ASA_2519: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	Tolumonas auensis DSM 9187	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_16239: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_2662: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)	Aeromonas salmonicida subsp. salmonicida A449	Tolumonas auensis DSM 9187	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
hmgC	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_16234: Fumarylacetoacetase (EC 3.7.1.2)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_2661: Fumarylacetoacetase (EC 3.7.1.2)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_2517: Fumarylacetoacetase (EC 3.7.1.2)	Tolumonas auensis DSM 9187	Fumarylacetoacetase (EC 3.7.1.2)
hmgB	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_16229: Maleylacetoacetate isomerase (EC 5.2.1.2)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_2660: Maleylacetoacetate isomerase (EC 5.2.1.2)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_2516: Maleylacetoacetate isomerase (EC 5.2.1.2)	Tolumonas auensis DSM 9187	Maleylacetoacetate isomerase (EC 5.2.1.2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog TyrR - Psychromonadaceae/Aeromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --