Regulog Fur - Desulfuromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 41 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Geobacter metallireducens GS-15	7	4
Geobacter sulfurreducens PCA	8	4
Geobacter uraniumreducens Rf4	5	3
Geobacter sp. FRC-32	6	4
Geobacter sp. M21	11	5
Geobacter lovleyi SZ	11	3
Pelobacter propionicus DSM 2379	12	6
Pelobacter carbinolicus str. DSM 2380	8	4
Desulfuromonas acetoxidans DSM 684	4	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
fur	* Geobacter metallireducens GS-15 Site: position = -29 score = 5.70644 sequence = TTGAAAATCACTTTCAG Gene: Gmet_2445: Ferric uptake regulation protein FUR	* Geobacter sulfurreducens PCA Site: position = -30 score = 5.26137 sequence = ATGATATTCACTTTCAG Gene: GSU1379: Ferric uptake regulation protein FUR	* Geobacter uraniumreducens Rf4 Site: position = 0 score = 5.71868 sequence = GTGAAAATCACTTTCAA Gene: Gura_3002: Ferric uptake regulation protein FUR	* Geobacter sp. FRC-32 Site: position = -30 score = 5.84982 sequence = GTGAAAATCATTTTCAA Gene: Geob_2252: Ferric uptake regulation protein FUR	2 Geobacter sp. M21* Gene: GM21_3769: Ferric uptake regulation protein FUR Site: position = -29 score = 5.11559 sequence = ATGACATCCACTTTCAA Gene: GM21_2626: Ferric uptake regulation protein FUR	* Geobacter lovleyi SZ Site: position = -79 score = 5.26448 sequence = CTGAAAATCGTTTTCAG Gene: Glov_2468: Ferric uptake regulation protein FUR	* Pelobacter propionicus DSM 2379 Site: position = -31 score = 5.33995 sequence = TTGAAATTCAACTTCAA Gene: Ppro_0772: Ferric uptake regulation protein FUR	* Pelobacter carbinolicus str. DSM 2380 Site: position = -27 score = 5.17804 sequence = TTGATATTCAATTTCAC Gene: Pcar_1952: Ferric uptake regulation protein FUR	* Desulfuromonas acetoxidans DSM 684 Site: position = -38 score = 5.35303 sequence = TTGAACATCATTTTCAT Gene: Dace_1982: Ferric uptake regulation protein FUR	Ferric uptake regulation protein FUR
feoB1	* Geobacter metallireducens GS-15 Site: position = -47 score = 5.51151 sequence = TTGAAAGTGAATATCAA Gene: Gmet_2444: Ferrous iron transport protein B	* Geobacter sulfurreducens PCA Site: position = -191 score = 5.21414 sequence = CTGAAAGTGATTTTCAC Gene: GSU1380: Ferrous iron transport protein B	* Geobacter uraniumreducens Rf4 Site: position = -51 score = 5.28611 sequence = ATGAAAGTGATAATCAA Gene: Gura_3001: Ferrous iron transport protein B	* Geobacter sp. FRC-32 Site: position = -41 score = 5.73248 sequence = TTGAAAATGACTATCAA Gene: Geob_2253: Ferrous iron transport protein B	* Geobacter sp. M21 Site: position = -63 score = 5.34013 sequence = ATGAAAGTGATATTCAT Gene: GM21_2625: Ferrous iron transport protein B	* Geobacter lovleyi SZ Site: position = -33 score = 5.62306 sequence = GTGAAAATGGTTTTCAA Gene: Glov_2467: Ferrous iron transport protein B	2 Pelobacter propionicus DSM 2379* Site: position = -40 score = 5.31302 sequence = GTGAAAATGAATGTCAA Gene: Ppro_0773: Ferrous iron transport protein B Site: position = -68 score = 5.83453 sequence = ATGAAAATGATTATCAA Gene: Ppro_3681: Ferrous iron transport protein B	Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_1951: Ferrous iron transport protein B	Desulfuromonas acetoxidans DSM 684	Ferrous iron transport protein B
Gura_3000	Geobacter metallireducens GS-15 Gene: Gmet_2443: hypothetical protein	Geobacter sulfurreducens PCA Gene: GSU1381: hypothetical protein	Geobacter uraniumreducens Rf4 Gene: Gura_3000: hypothetical protein	Geobacter sp. FRC-32 Gene: Geob_2254: hypothetical protein	Geobacter sp. M21 Gene: GM21_2624: hypothetical protein	Geobacter lovleyi SZ Gene: Glov_2466: hypothetical protein	Pelobacter propionicus DSM 2379 Gene: Ppro_0774: hypothetical protein	Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_3335: hypothetical protein	Desulfuromonas acetoxidans DSM 684	hypothetical protein
ideR	Geobacter metallireducens GS-15 Gene: Gmet_2442: iron (metal) dependent repressor, DtxR family	Geobacter sulfurreducens PCA Gene: GSU1382: iron (metal) dependent repressor, DtxR family	Geobacter uraniumreducens Rf4 Gene: Gura_2999: iron (metal) dependent repressor, DtxR family	Geobacter sp. FRC-32 Gene: Geob_2255: iron (metal) dependent repressor, DtxR family	Geobacter sp. M21 Gene: GM21_2623: iron (metal) dependent repressor, DtxR family	Geobacter lovleyi SZ Gene: Glov_2465: iron (metal) dependent repressor, DtxR family	2 Pelobacter propionicus DSM 2379 Gene: Ppro_3680: iron (metal) dependent repressor, DtxR family Gene: Ppro_0775: iron (metal) dependent repressor, DtxR family	Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_1950: iron (metal) dependent repressor, DtxR family	Desulfuromonas acetoxidans DSM 684	iron (metal) dependent repressor, DtxR family

CRON 2.
PF10087	Geobacter metallireducens GS-15 Gene: Gmet_2832: hypothetical protein	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21	* Geobacter lovleyi SZ Site: position = -37 score = 5.21826 sequence = ATGATATCGATTTTCAT Gene: Glov_1790: hypothetical protein	* Pelobacter propionicus DSM 2379 Site: position = -38 score = 5.17251 sequence = TTGATAATGGATATCAA Gene: Ppro_0789: hypothetical protein	* Pelobacter carbinolicus str. DSM 2380 Site: position = -115 score = 5.38601 sequence = TTGAAAACGGTTTTCAT Gene: Pcar_1337: hypothetical protein	* Desulfuromonas acetoxidans DSM 684 Site: position = -78 score = 5.96528 sequence = TTGAAAATGACTTTCAA Gene: Dace_0095: hypothetical protein	hypothetical protein
Glov_1789	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21	Geobacter lovleyi SZ Gene: Glov_1789: hypothetical protein	Pelobacter propionicus DSM 2379	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	hypothetical protein
Glov_1782	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21	2 Geobacter lovleyi SZ Gene: Glov_1788: hypothetical protein Gene: Glov_1782: hypothetical protein	Pelobacter propionicus DSM 2379 Gene: Ppro_1242: hypothetical protein	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	hypothetical protein
feoA1	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA Gene: GSU3270: Ferrous iron transport protein A	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	* Geobacter sp. M21 Site: position = -38 score = 4.57898 sequence = GTGAAAATGAAAATTAA Gene: GM21_3767: Ferrous iron transport protein A	Geobacter lovleyi SZ Gene: Glov_1787: Ferrous iron transport protein A	Pelobacter propionicus DSM 2379 Gene: Ppro_0791: Ferrous iron transport protein A	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	Ferrous iron transport protein A
feoA2	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21 Gene: GM21_3766: Ferrous iron transport protein A	Geobacter lovleyi SZ Gene: Glov_1786: Ferrous iron transport protein A	* Pelobacter propionicus DSM 2379 Site: position = -29 score = 4.43066 sequence = ATGAAAATAACGGTCAG Gene: Ppro_0792: Ferrous iron transport protein A	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	Ferrous iron transport protein A
feoB2	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA Gene: GSU3268: Ferrous iron transport protein B	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21 Gene: GM21_3765: Ferrous iron transport protein B	Geobacter lovleyi SZ Gene: Glov_1785: Ferrous iron transport protein B	Pelobacter propionicus DSM 2379 Gene: Ppro_0793: Ferrous iron transport protein B	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	Ferrous iron transport protein B
Ppro_0794	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA Gene: GSU3267: hypothetical protein	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21 Gene: GM21_3764: hypothetical protein	Geobacter lovleyi SZ Gene: Glov_1784: hypothetical protein	Pelobacter propionicus DSM 2379 Gene: Ppro_0794: hypothetical protein	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	hypothetical protein
PF04966	Geobacter metallireducens GS-15	* Geobacter sulfurreducens PCA Site: position = -83 score = 5.22654 sequence = TTGAAAATGGAATTCAT Gene: GSU3271: Iron-regulated porin, similar to carbohydrate-selective porin OprB	Geobacter uraniumreducens Rf4 Gene: Gura_0779: Iron-regulated porin, similar to carbohydrate-selective porin OprB	Geobacter sp. FRC-32	* Geobacter sp. M21 Site: position = -135 score = 5.41575 sequence = ATGAAATTAATTTTCAG Gene: GM21_3768: Iron-regulated porin, similar to carbohydrate-selective porin OprB	Geobacter lovleyi SZ	Pelobacter propionicus DSM 2379	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	Iron-regulated porin, similar to carbohydrate-selective porin OprB
GSU3274	Geobacter metallireducens GS-15	* Geobacter sulfurreducens PCA Site: position = -66 score = 5.46067 sequence = GTGAAAAACATTTTCAA Gene: GSU3274: cytochrome c family protein, putative	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21	Geobacter lovleyi SZ	Pelobacter propionicus DSM 2379 Gene: Ppro_0828: cytochrome c family protein, putative	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	cytochrome c family protein, putative
Gmet_2833	* Geobacter metallireducens GS-15 Site: position = -38 score = 5.37704 sequence = ATGAAATGGAATTTCAA Gene: Gmet_2833: hypothetical protein	Geobacter sulfurreducens PCA Gene: GSU3273: hypothetical protein	Geobacter uraniumreducens Rf4 Gene: Gura_2222: hypothetical protein	* Geobacter sp. FRC-32 Site: position = -57 score = 5.58071 sequence = TTGACATTGATTTTCAA Gene: Geob_0727: hypothetical protein	* Geobacter sp. M21 Site: position = -119 score = 4.55254 sequence = GTGATAACAGTTTTCAT Gene: GM21_1219: hypothetical protein	Geobacter lovleyi SZ	* Pelobacter propionicus DSM 2379 Site: position = -51 score = 4.91472 sequence = TTGAAAACAAAGTTCAA Gene: Ppro_0788: hypothetical protein	* Pelobacter carbinolicus str. DSM 2380 Site: position = -45 score = 4.9497 sequence = TTGAAAACGAAAGTCAA Gene: Pcar_0068: hypothetical protein	Desulfuromonas acetoxidans DSM 684	hypothetical protein

CRON 3.
psp	* Geobacter metallireducens GS-15 Site: position = -199 score = 5.39735 sequence = TTGAAAAAGACTTTCAT Site: position = -100 score = 5.4445 sequence = ATGAATATGAATTTCAA Gene: Gmet_2944: Iron-regulated porin, similar to phosphate-selective porin	Geobacter sulfurreducens PCA	* Geobacter uraniumreducens Rf4 Site: position = -225 score = 5.57612 sequence = TTGAAAAAGACTTTCAA Site: position = -130 score = 5.20509 sequence = ATGAAAGTGGATATCAA Gene: Gura_0930: Iron-regulated porin, similar to phosphate-selective porin	* Geobacter sp. FRC-32 Site: position = -180 score = 4.82969 sequence = TTGAAATCTACTTTCAG Site: position = -79 score = 5.1395 sequence = ATGAAAATCACAATCAG Gene: Geob_1748: Iron-regulated porin, similar to phosphate-selective porin	* Geobacter sp. M21 Site: position = -101 score = 4.43502 sequence = TTGAAACTGAAATACAA Gene: GM21_0447: Iron-regulated porin, similar to phosphate-selective porin	Geobacter lovleyi SZ	Pelobacter propionicus DSM 2379	Pelobacter carbinolicus str. DSM 2380	Desulfuromonas acetoxidans DSM 684	Iron-regulated porin, similar to phosphate-selective porin

CRON 4.
feoA	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21	Geobacter lovleyi SZ	Pelobacter propionicus DSM 2379	* Pelobacter carbinolicus str. DSM 2380 Site: position = -132 score = 5.05845 sequence = TTGAAAACGATAGTCAA Site: position = -77 score = 5.62854 sequence = ATGAAATTCGTTTTCAA Gene: Pcar_0883: Ferrous iron transport protein A	* Desulfuromonas acetoxidans DSM 684 Site: position = -55 score = 5.38555 sequence = ATGAAATACACTTTCAA Gene: Dace_2814: Ferrous iron transport protein A	Ferrous iron transport protein A
feoB	Geobacter metallireducens GS-15	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter sp. FRC-32	Geobacter sp. M21	Geobacter lovleyi SZ	Pelobacter propionicus DSM 2379	Pelobacter carbinolicus str. DSM 2380 Gene: Pcar_0882: Ferrous iron transport protein B	Desulfuromonas acetoxidans DSM 684 Gene: Dace_2815: Ferrous iron transport protein B	Ferrous iron transport protein B

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Fur - Desulfuromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --