Regulog NrtR2 - Cyanobacteria
| Regulator type: | Transcription factor |
| Regulator family: | NrtR |
| Regulation mode: | repressor |
| Biological process: | NAD biosynthesis |
| Effector: | Adenosine diphosphate ribose |
| Phylum: | Cyanobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By trascription factor - NrtR
- By TF family - NrtR
- By effector - Adenosine diphosphate ribose
- By pathway - NAD biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Cyanothece sp. ATCC 51142 | ||
| Cyanothece sp. PCC 7425 | 5 | 1 |
| Cyanothece sp. PCC 8801 | ||
| Gloeobacter violaceus PCC 7421 | ||
| Microcystis aeruginosa NIES-843 | ||
| Nostoc sp. PCC 7120 | ||
| Prochlorococcus marinus str. MIT 9313 | ||
| Synechococcus elongatus PCC 7942 | ||
| Synechococcus sp. JA-3-3Ab | ||
| Synechococcus sp. PCC 7002 | 3 | 3 |
| Synechococcus sp. WH 8102 | ||
| Synechocystis sp. PCC 6803 | ||
| Thermosynechococcus elongatus BP-1 | ||
| Trichodesmium erythraeum IMS101 |
| Genes | Function | ||||||||||||||
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| CRON 1. | |||||||||||||||
| Cyan7425_2213 |
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Cyanothece sp. PCC 7425 Site: position = -49 score = 5.13245 sequence = ATAGTGTTATTGAGACACTAT Site: position = -26 score = 5.92812 sequence = TTAGTGTAGTTTATACACAAA Gene: Cyan7425_2213: hypothetical protein |
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hypothetical protein |
| draG |
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Gene: Cyan7425_2212: ADP-ribosylglycohydrolase superfamkily |
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Gene: alr3188: ADP-ribosylglycohydrolase superfamkily |
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ADP-ribosylglycohydrolase superfamkily |
| Cyan7425_2211 |
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Gene: Cyan7425_2211: hypothetical protein |
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hypothetical protein |
| pncA |
Gene: cce_1052: Nicotinamidase (EC 3.5.1.19) |
Gene: Cyan7425_2210: Nicotinamidase (EC 3.5.1.19) |
Gene: PCC8801_3726: Nicotinamidase (EC 3.5.1.19) |
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Gene: alr5162: Nicotinamidase (EC 3.5.1.19) |
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Gene: CYA_1522: Nicotinamidase (EC 3.5.1.19) |
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Synechococcus sp. PCC 7002 Site: position = -66 score = 4.18529 sequence = aatGTGTtttTaaaACACcAc Gene: SYNPCC7002_A0642: Nicotinamidase (EC 3.5.1.19) |
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Gene: Tery_2452: Nicotinamidase (EC 3.5.1.19) |
Nicotinamidase (EC 3.5.1.19) |
| Cyan7425_2209 |
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Gene: Cyan7425_2209: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||||||||||
| nadE |
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Gene: Synpcc7942_0105: NAD synthetase (EC 6.3.1.5) |
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Synechococcus sp. PCC 7002 Site: position = -123 score = 5.67676 sequence = TTGATGTAGAATCGACACTAA Gene: SYNPCC7002_A1784: NAD synthetase (EC 6.3.1.5) |
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NAD synthetase (EC 6.3.1.5) |
| CRON 3. | |||||||||||||||
| pncB |
Gene: cce_2759: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
Gene: Cyan7425_2236: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
Gene: PCC8801_0271: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
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Gene: alr2482: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
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Gene: CYA_1521: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
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Synechococcus sp. PCC 7002 Site: position = -50 score = 5.54082 sequence = TTATTGTAAAATAAACACTAA Gene: SYNPCC7002_A0508: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
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Gene: tlr1177: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
Gene: Tery_0318: Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |