Regulog NagQ - Caulobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NagQ
- By taxonomy - Caulobacterales
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | 18 | 5 |
| Caulobacter segnis ATCC 21756 | 12 | 4 |
| Caulobacter sp. K31 | 4 | 2 |
| Phenylobacterium zucineum HLK1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| nagQ |
*2
Caulobacter crescentus CB15 Site: position = -125 score = -1.14953 sequence = AAGACCAAAAAGAAACCA Gene: CC0445: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family Site: position = -41 score = -0.419926 sequence = CATTCCATTTTAATACCA Gene: CC0536: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
*2
Caulobacter segnis ATCC 21756 Site: position = -110 score = -1.14953 sequence = AAGGCCAAAAAGAAACCA Gene: Cseg_3741: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family Site: position = -150 score = -0.419926 sequence = CATTCCATTTTAATACCA Gene: Cseg_3142: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
*
Caulobacter sp. K31 Site: position = -108 score = -0.278753 sequence = AAGGCCAAAAAAGAACCA Site: position = -203 score = -0.935168 sequence = AAGCCCAATTCGATACCA Gene: Caul_0291: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
|
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
| nagB2 |
2
Caulobacter crescentus CB15 Gene: CC0444: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) Gene: CC0535: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Cseg_3143: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
Gene: Caul_0290: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
|
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
| nagA |
2
Caulobacter crescentus CB15 Gene: CC0443: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Gene: CC0534: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
2
Caulobacter segnis ATCC 21756 Gene: Cseg_3742: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Gene: Cseg_3144: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: Caul_0289: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| CC0533 |
Gene: CC0533: Alpha-1,2-mannosidase |
Gene: Cseg_3145: Alpha-1,2-mannosidase |
|
|
Alpha-1,2-mannosidase |
| CRON 2. | |||||
| omp_nag |
*
Caulobacter crescentus CB15 Site: position = -152 score = 5.30909 sequence = TGGCACTATAATGGTATT Gene: CC0539: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
Gene: Cseg_3139: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
|
|
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
| anaG |
Gene: CC0540: Alpha-N-acetylglucosaminidase (EC 3.2.1.50) |
Gene: Cseg_3138: Alpha-N-acetylglucosaminidase (EC 3.2.1.50) |
|
|
Alpha-N-acetylglucosaminidase (EC 3.2.1.50) |
| nagX |
Gene: CC0541: N-acetylglucosamine related transporter, NagX |
Gene: Cseg_3137: N-acetylglucosamine related transporter, NagX |
|
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N-acetylglucosamine related transporter, NagX |
| CC0542 |
Gene: CC0542: Predicted periplasmic phosphohydrolase |
Gene: Cseg_3136: Predicted periplasmic phosphohydrolase |
|
|
Predicted periplasmic phosphohydrolase |
| CC0543 |
Gene: CC0543: Predicted hydrolase |
Gene: Cseg_3135: Predicted hydrolase |
|
|
Predicted hydrolase |
| CRON 3. | |||||
| omp_nag |
|
|
*
Caulobacter sp. K31 Site: position = -67 score = 4.53501 sequence = TGGTATCGAATTGGGCTT Site: position = -162 score = 4.73431 sequence = TGGTTCTTTTTTGGCCTT Gene: Caul_0292: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
|
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
| CRON 4. | |||||
| omp_nag |
*
Caulobacter crescentus CB15 Site: position = -164 score = 4.9632 sequence = TGGTTTCTTTTTGGTCTT Gene: CC0446: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
*
Caulobacter segnis ATCC 21756 Site: position = -164 score = 4.73431 sequence = TGGTTTCTTTTTGGCCTT Gene: Cseg_3740: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
|
|
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor |
| hex |
Gene: CC0447: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: Cseg_3739: Beta-hexosaminidase (EC 3.2.1.52) |
Gene: Caul_0293: Beta-hexosaminidase (EC 3.2.1.52) |
|
Beta-hexosaminidase (EC 3.2.1.52) |
| ptsI |
*2
Caulobacter crescentus CB15 Site: position = -118 score = -1.28181 sequence = GATGCCAATGTGAGACCA Gene: CC0537: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Gene: CC0448: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
*2
Caulobacter segnis ATCC 21756 Site: position = -64 score = 4.78432 sequence = TGGTATTAAAATGGAATG Gene: Cseg_3141: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Gene: Cseg_3738: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
Gene: Caul_0294: PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
|
PTS system, glucose-specific IIA component (EC 2.7.1.69) / Phosphocarrier protein of PTS system / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
| nagE |
2
Caulobacter crescentus CB15 Gene: CC0538: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Gene: CC0449: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
2
Caulobacter segnis ATCC 21756 Gene: Cseg_3140: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Gene: Cseg_3737: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: Caul_0295: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |