Regulog NagQ - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - NagQ
- By TF family - GntR/Others
- By effector - N-acetylglucosamine
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Rhodospirillum rubrum ATCC 11170 | ||
| Magnetospirillum magnetotacticum MS-1 | ||
| Magnetospirillum magneticum AMB-1 | ||
| Azospirillum sp. B510 | 6 | 4 |
| Rhodospirillum centenum SW | ||
| Gluconacetobacter diazotrophicus PAl 5 | ||
| Acetobacter pasteurianus IFO 3283-01 | ||
| Gluconobacter oxydans 621H | ||
| Granulibacter bethesdensis CGDNIH1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| nagQ |
|
|
|
*
Azospirillum sp. B510 Site: position = -50 score = 6.60304 sequence = AGGCCTT-(4)-TGGTATC Gene: AZL_b05040: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
|
|
|
|
|
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
| CRON 2. | ||||||||||
| murQ |
|
Gene: Magn03006323: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
|
*
Azospirillum sp. B510 Site: position = -56 score = -1.11243 sequence = CAGTCCA-(4)-AATACCA Site: position = -169 score = -0.978188 sequence = GATACCA-(4)-AAGGCCT Gene: AZL_b05050: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
|
Gene: Gdia_3142: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
Gene: APA01_04290: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
Gene: GOX0877: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
|
N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
| nagE |
|
|
|
Gene: AZL_b05060: PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
|
|
|
|
|
PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
| CRON 3. | ||||||||||
| wecA |
Gene: Rru_A3657: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: Magn03010496: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: amb0039: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
*
Azospirillum sp. B510 Site: position = -91 score = 6.943 sequence = TGGTATC-(3)-AGGTTTT Gene: AZL_022170: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: RC1_1716: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: Gdia_0249: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: APA01_01010: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: GOX1920: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Gene: GbCGDNIH1_0162: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) |
| CRON 4. | ||||||||||
| nagB2 |
|
|
|
*
Azospirillum sp. B510 Site: position = -44 score = 6.9962 sequence = AGGTCTT-(4)-TGGTATC Site: position = -165 score = 6.72486 sequence = TGGTATT-(4)-TGGTTCC Gene: AZL_b05010: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
|
|
|
|
|
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) |
| nagA |
|
|
|
Gene: AZL_b05020: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: RC1_1413: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|
|
|
|
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |