Regulog NnrR - Caulobacterales
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Denitrification |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Caulobacterales
- By trascription factor - NnrR
- By TF family - CRP
- By effector - Nitric oxide
- By pathway - Denitrification
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | ||
| Caulobacter segnis ATCC 21756 | 4 | 4 |
| Caulobacter sp. K31 | ||
| Phenylobacterium zucineum HLK1 | 5 | 5 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| nnrR |
|
Gene: Cseg_3034: Nitric oxide responding transcriptional regulator NnrR, Crp family |
|
*
Phenylobacterium zucineum HLK1 Site: position = -198 score = 4.45939 sequence = CGTTGATCTTGCGCAACC Gene: PHZ_c0618: Nitric oxide responding transcriptional regulator NnrR, Crp family |
Nitric oxide responding transcriptional regulator NnrR, Crp family |
| CRON 2. | |||||
| nirK |
|
*
Caulobacter segnis ATCC 21756 Site: position = -83 score = 4.93832 sequence = GTTTGTCCATGCACAAAG Site: position = -185 score = 3.94152 sequence = TTTTGCGCTGTCTCGAAC Gene: Cseg_3038: nitrite reductase, copper-containing protein |
|
*
Phenylobacterium zucineum HLK1 Site: position = -85 score = 4.22236 sequence = GGTTGACCGTGCGCAATG Gene: PHZ_c0614: nitrite reductase, copper-containing protein |
nitrite reductase, copper-containing protein |
| CRON 3. | |||||
| COG3794 |
|
*
Caulobacter segnis ATCC 21756 Site: position = -92 score = 3.89981 sequence = GCTTGCTTTGGAGCAAGG Site: position = -146 score = 3.60496 sequence = GATTGTCGATCGACAAGG Gene: Cseg_3035: Pseudoazurin precursor |
|
*
Phenylobacterium zucineum HLK1 Site: position = -99 score = 4.73797 sequence = GATTGTTCTGGCGCAAAG Gene: PHZ_c0617: Pseudoazurin precursor |
Pseudoazurin precursor |
| CRON 4. | |||||
| norB |
|
*
Caulobacter segnis ATCC 21756 Site: position = -92 score = 4.36542 sequence = GGTTGCTCCCGAGCAACG Gene: Cseg_3031: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
|
*
Phenylobacterium zucineum HLK1 Site: position = -96 score = 4.45939 sequence = GGTTGCGCAAGATCAACG Gene: PHZ_c0619: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
| CRON 5. | |||||
| dnrN |
|
*
Caulobacter segnis ATCC 21756 Site: position = -153 score = 3.94152 sequence = GTTCGAGACAGCGCAAAA Gene: Cseg_3039: regulator of cell morphogenesis and NO signaling |
|
*2
Phenylobacterium zucineum HLK1 Gene: PHZ_c0616: regulator of cell morphogenesis and NO signaling Site: position = -64 score = 5.1147 sequence = GTTTGTCCGGGCGCAAAG Gene: PHZ_c1196: regulator of cell morphogenesis and NO signaling |
regulator of cell morphogenesis and NO signaling |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |