Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NnrR - Rhodospirillales

Properties
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodospirillum rubrum ATCC 11170
Magnetospirillum magnetotacticum MS-1
Magnetospirillum magneticum AMB-1
Azospirillum sp. B510
Rhodospirillum centenum SW 4 3
Gluconacetobacter diazotrophicus PAl 5
Acetobacter pasteurianus IFO 3283-01
Gluconobacter oxydans 621H
Granulibacter bethesdensis CGDNIH1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nnrS
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009099: NnrS protein involved in response to NO
 
Magnetospirillum magneticum AMB-1

Gene: amb2334: NnrS protein involved in response to NO
 
Azospirillum sp. B510

Gene: AZL_d02750: NnrS protein involved in response to NO
*
Rhodospirillum centenum SW

Site:
position = -74
score = 4.21679
sequence = ACTTGCCCGCGGACAAAG

Gene: RC1_3978: NnrS protein involved in response to NO
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
NnrS protein involved in response to NO
nnrR
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW

Gene: RC1_3977: Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family)
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family)
 
CRON 2.
dnrN
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
*
Rhodospirillum centenum SW

Site:
position = -94
score = 4.82827
sequence = GTTTGCGCGCCGACAAAG

Site:
position = -166
score = 4.47083
sequence = CTTTGTCCGCGGACAACC

Gene: RC1_3975: Nitric oxide-dependent regulator DnrN or NorA
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Nitric oxide-dependent regulator DnrN or NorA
 
CRON 3.
norB
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
*
Rhodospirillum centenum SW

Site:
position = -124
score = 4.47083
sequence = GGTTGTCCGCGGACAAAG

Site:
position = -196
score = 4.82827
sequence = CTTTGTCGGCGCGCAAAC

Gene: RC1_3976: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
Gluconacetobacter diazotrophicus PAl 5
 
Acetobacter pasteurianus IFO 3283-01
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise