Regulog PdhR - Psychromonadaceae/Aeromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Pyruvate metabolism |
| Effector: | Pyruvate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - PdhR
- By TF family - GntR/Others
- By effector - Pyruvate
- By pathway - Pyruvate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Psychromonas ingrahamii 37 | 4 | 1 |
| Psychromonas sp. CNPT3 | 4 | 1 |
| Moritella sp. PE36 | 3 | 1 |
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 4 | 1 |
| Aeromonas salmonicida subsp. salmonicida A449 | 4 | 1 |
| Tolumonas auensis DSM 9187 | 4 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| pdhR |
*
Psychromonas ingrahamii 37 Site: position = -52 score = 5.93997 sequence = AATGGTAATACCAAT Site: position = -186 score = 4.84343 sequence = ATTGGTCTTACCTTT Gene: Ping_2928: Transcriptional repressor for pyruvate dehydrogenase complex |
*
Psychromonas sp. CNPT3 Site: position = -39 score = 5.81354 sequence = ATTGGTCATACCATT Gene: PCNPT3_04354: Transcriptional repressor for pyruvate dehydrogenase complex |
*
Moritella sp. PE36 Site: position = -210 score = 5.84379 sequence = AGTGGTAAGACCAAT Gene: PE36_00409: Transcriptional repressor for pyruvate dehydrogenase complex |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -31 score = 6.25495 sequence = ATTGGTAATACCAAT Site: position = -170 score = 5.71736 sequence = ATTGGTCTGACCAAT Gene: AHA_3864: Transcriptional repressor for pyruvate dehydrogenase complex |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -31 score = 6.25495 sequence = ATTGGTAATACCAAT Site: position = -170 score = 6.06259 sequence = ATTGGTCAGACCAAT Gene: ASA_0418: Transcriptional repressor for pyruvate dehydrogenase complex |
*
Tolumonas auensis DSM 9187 Site: position = -29 score = 5.90972 sequence = ATTGGTAATACCAAG Gene: Tola_2577: Transcriptional repressor for pyruvate dehydrogenase complex |
Transcriptional repressor for pyruvate dehydrogenase complex |
| aceE |
Gene: Ping_2927: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: PCNPT3_04359: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: PE36_00414: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: AHA_3863: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: ASA_0419: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Tola_2576: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
| aceF |
Gene: Ping_2926: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: PCNPT3_04364: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: PE36_00419: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: AHA_3862: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: ASA_0420: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Tola_2575: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
| lpdA |
Gene: Ping_2925: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: PCNPT3_04369: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: PE36_00424: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: AHA_3861: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: ASA_0421: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: Tola_2574: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |