Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog HexR - Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 38 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Pseudoalteromonas atlantica T6c 15 9
Alteromonas macleodii 'Deep ecotype' 18 10
Glaciecola sp. HTCC2999 11 6
Colwellia psychrerythraea 34H 8 4
Alteromonadales bacterium TW-7
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas tunicata D2
Idiomarina baltica OS145 7 2
Idiomarina loihiensis L2TR
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gapA
*2
Pseudoalteromonas atlantica T6c

Gene: Patl_2596: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)

Site:
position = -76
score = 5.28558
sequence = TCGTAATTATATTTCAT

Gene: Patl_1634: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -42
score = 4.69146
sequence = ACGTAATTTATTTTCAT

Gene: MADE_01250: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Glaciecola sp. HTCC2999

Site:
position = -31
score = 4.79098
sequence = ATGTAACTTAATTTCAT

Site:
position = -83
score = 5.46914
sequence = ATGTAATAAAACTACAT

Gene: GHTCC_010100004770: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
*
Colwellia psychrerythraea 34H

Site:
position = -38
score = 5.00723
sequence = GTGTAATTTTACTACAT

Gene: CPS_2340: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Alteromonadales bacterium TW-7

Gene: ATW7_07364: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1368: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_18740: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Idiomarina baltica OS145

Gene: OS145_00590: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
 
Idiomarina loihiensis L2TR
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
aldE
 
Pseudoalteromonas atlantica T6c

Gene: Patl_1633: Predicted aldose 1-epimerase
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01249: Predicted aldose 1-epimerase
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100004765: Predicted aldose 1-epimerase
 
Colwellia psychrerythraea 34H

Gene: CPS_3627: Predicted aldose 1-epimerase
 
Alteromonadales bacterium TW-7

Gene: ATW7_15859: Predicted aldose 1-epimerase
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa2966: Predicted aldose 1-epimerase
 
Pseudoalteromonas tunicata D2

Gene: PTD2_05705: Predicted aldose 1-epimerase
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Predicted aldose 1-epimerase
hexR
*
Pseudoalteromonas atlantica T6c

Site:
position = -176
score = 5.00621
sequence = TTGTAATTTTACAACGT

Gene: Patl_0969: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -193
score = 5.50169
sequence = ATGTAGTAAAATTACAA

Site:
position = -98
score = 4.55331
sequence = TTGTCAAAAAATTACAT

Gene: MADE_01243: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Glaciecola sp. HTCC2999

Site:
position = -173
score = 5.53424
sequence = TTGTAGTAAAATTACAA

Gene: GHTCC_010100004730: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Colwellia psychrerythraea 34H

Site:
position = -139
score = 4.95658
sequence = ATGAAATAAAATTTCAT

Gene: CPS_2280: Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
*
Idiomarina baltica OS145

Site:
position = -97
score = 4.87968
sequence = TTGTAACTTTACTACAT

Site:
position = -34
score = 5.11997
sequence = TCGTAACTAAATTACAT

Gene: OS145_00585: Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
Idiomarina loihiensis L2TR
Central carbohydrate metabolism transcription regulator HexR, RpiR family
pykA
*
Pseudoalteromonas atlantica T6c

Site:
position = -190
score = 5.67502
sequence = TCGTAATTAAATTACGA

Gene: Patl_0968: Pyruvate kinase (EC 2.7.1.40)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -98
score = 5.39685
sequence = CTGTAATAAAATTACGT

Gene: MADE_01242: Pyruvate kinase (EC 2.7.1.40)
*
Glaciecola sp. HTCC2999

Site:
position = -69
score = 5.2587
sequence = TTGTAATATAATTACCT

Site:
position = -120
score = 4.72401
sequence = TTGAAAATTAATTACGT

Gene: GHTCC_010100004725: Pyruvate kinase (EC 2.7.1.40)
 
Colwellia psychrerythraea 34H

Gene: CPS_2279: Pyruvate kinase (EC 2.7.1.40)
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Pyruvate kinase (EC 2.7.1.40)
 
CRON 2.
glgP
*
Pseudoalteromonas atlantica T6c

Site:
position = -71
score = 5.48985
sequence = TTGTAATTTAATTACGG

Gene: Patl_2197: Glycogen phosphorylase (EC 2.4.1.1)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -24
score = 5.4573
sequence = CTGTAATTAAATTACGT

Gene: MADE_02552: Glycogen phosphorylase (EC 2.4.1.1)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Glycogen phosphorylase (EC 2.4.1.1)
 
CRON 3.
ppsA
*2
Pseudoalteromonas atlantica T6c

Site:
position = -193
score = 5.46847
sequence = TAGTAATATAATTACAT

Gene: Patl_1744: Phosphoenolpyruvate synthase (EC 2.7.9.2)

Gene: Patl_2594: Phosphoenolpyruvate synthase (EC 2.7.9.2)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -254
score = 5.31914
sequence = GTGTAATTTTATTACAA

Gene: MADE_02382: Phosphoenolpyruvate synthase (EC 2.7.9.2)
*
Glaciecola sp. HTCC2999

Site:
position = -151
score = 5.0949
sequence = GTGTAATTTAATTACAG

Gene: GHTCC_010100007992: Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
Colwellia psychrerythraea 34H

Gene: CPS_3011: Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
Alteromonadales bacterium TW-7

Gene: ATW7_00625: Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAb0557: Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_01726: Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
Idiomarina baltica OS145

Gene: OS145_06037: Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
Idiomarina loihiensis L2TR

Gene: IL1316: Phosphoenolpyruvate synthase (EC 2.7.9.2)
Phosphoenolpyruvate synthase (EC 2.7.9.2)
 
CRON 4.
zwf
*
Pseudoalteromonas atlantica T6c

Site:
position = -116
score = 5.00621
sequence = ACGTTGTAAAATTACAA

Gene: Patl_0970: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -203
score = 4.55331
sequence = ATGTAATTTTTTGACAA

Site:
position = -108
score = 5.50169
sequence = TTGTAATTTTACTACAT

Gene: MADE_01244: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Glaciecola sp. HTCC2999

Site:
position = -98
score = 5.53424
sequence = TTGTAATTTTACTACAA

Gene: GHTCC_010100004735: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Colwellia psychrerythraea 34H

Site:
position = -166
score = 5.50169
sequence = ATGTAGTAAAATTACAA

Site:
position = -105
score = 4.94012
sequence = ATGTAGTTTAGTTACAA

Gene: CPS_2281: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Alteromonadales bacterium TW-7

Gene: ATW7_06528: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1140: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_17635: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Idiomarina baltica OS145

Site:
position = -48
score = 4.87968
sequence = ATGTAGTAAAGTTACAA

Site:
position = -111
score = 5.11997
sequence = ATGTAATTTAGTTACGA

Gene: OS145_00580: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Idiomarina loihiensis L2TR
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
 
Pseudoalteromonas atlantica T6c

Gene: Patl_0971: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01245: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100004740: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Colwellia psychrerythraea 34H

Gene: CPS_2282: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Alteromonadales bacterium TW-7

Gene: ATW7_06533: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1141: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Pseudoalteromonas tunicata D2

Gene: PTD2_17640: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Idiomarina baltica OS145

Gene: OS145_00575: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Idiomarina loihiensis L2TR
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
edd
 
Pseudoalteromonas atlantica T6c

Gene: Patl_0972: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01246: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100004745: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Colwellia psychrerythraea 34H

Gene: CPS_2283: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Alteromonadales bacterium TW-7

Gene: ATW7_07374: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1366: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_18730: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Idiomarina baltica OS145

Gene: OS145_00570: Phosphogluconate dehydratase (EC 4.2.1.12)
 
Idiomarina loihiensis L2TR
Phosphogluconate dehydratase (EC 4.2.1.12)
glk
 
Pseudoalteromonas atlantica T6c

Gene: Patl_0973: Glucokinase (EC 2.7.1.2)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01247: Glucokinase (EC 2.7.1.2)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100004750: Glucokinase (EC 2.7.1.2)
 5
Colwellia psychrerythraea 34H

Gene: CPS_3710: Glucokinase (EC 2.7.1.2)

Gene: CPS_0982: Glucokinase (EC 2.7.1.2)

Gene: CPS_0976: Glucokinase (EC 2.7.1.2)

Gene: CPS_0247: Glucokinase (EC 2.7.1.2)

Gene: CPS_2390: Glucokinase (EC 2.7.1.2)
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145

Gene: OS145_00565: Glucokinase (EC 2.7.1.2)
 
Idiomarina loihiensis L2TR
Glucokinase (EC 2.7.1.2)
eda
 
Pseudoalteromonas atlantica T6c

Gene: Patl_0974: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01248: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

Gene: MADE_01491: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100004755: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Colwellia psychrerythraea 34H

Gene: CPS_2284: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 2
Alteromonadales bacterium TW-7

Gene: ATW7_07369: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

Gene: ATW7_06268: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 2
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1367: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

Gene: PSHAa1744: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_18735: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Idiomarina baltica OS145

Gene: OS145_00560: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Idiomarina loihiensis L2TR
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
CRON 5.
ppc
 
Pseudoalteromonas atlantica T6c

Gene: Patl_0606: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -224
score = 5.1934
sequence = CTGAAATTAAATTACAA

Gene: MADE_00742: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100007117: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Colwellia psychrerythraea 34H
 
Alteromonadales bacterium TW-7

Gene: ATW7_02637: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAb0314: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_02991: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
 
CRON 6.
bkdA1
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2036: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -276
score = 5.8415
sequence = TTGTAATTTAATTACAT

Gene: MADE_01954: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_1582: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
 
Alteromonadales bacterium TW-7

Gene: ATW7_13253: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1632: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_19360: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
 
Idiomarina baltica OS145

Gene: OS145_01872: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
 
Idiomarina loihiensis L2TR

Gene: IL1680: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
bkdA2
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2037: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01955: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_1583: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Alteromonadales bacterium TW-7

Gene: ATW7_13248: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1631: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_19365: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Idiomarina baltica OS145

Gene: OS145_01867: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
 
Idiomarina loihiensis L2TR

Gene: IL1679: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
bkdB
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2038: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01956: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_1584: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Alteromonadales bacterium TW-7

Gene: ATW7_13243: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1630: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_19370: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Idiomarina baltica OS145

Gene: OS145_01862: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
Idiomarina loihiensis L2TR

Gene: IL1678: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
 
CRON 7.
MADE_00998
 
Pseudoalteromonas atlantica T6c
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_00998: Isoamylase protein-like protein
*
Glaciecola sp. HTCC2999

Site:
position = -117
score = 5.78106
sequence = ATGTAATTTTATTACAA

Gene: GHTCC_010100006532: Isoamylase protein-like protein
 
Colwellia psychrerythraea 34H
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Isoamylase protein-like protein
 
CRON 8.
cpsA
*
Pseudoalteromonas atlantica T6c

Site:
position = -237
score = 4.75407
sequence = TCGTAATTATACAACAG

Gene: Patl_1070: Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -254
score = 5.52892
sequence = CTGTAATAAAATTACAA

Gene: MADE_02480: Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
manC
 
Pseudoalteromonas atlantica T6c

Gene: Patl_1792: Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_02481: Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)

Gene: MADE_00967: Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100005045: Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
 
Colwellia psychrerythraea 34H

Gene: CPS_4988: Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
 
CRON 9.
pckA
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2282: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -152
score = 5.25204
sequence = TTGTAATTAATTTACAA

Gene: MADE_03951: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100007187: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Colwellia psychrerythraea 34H

Gene: CPS_4595: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Alteromonadales bacterium TW-7

Gene: ATW7_17462: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa0228: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_16786: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Idiomarina baltica OS145

Gene: OS145_02115: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
Idiomarina loihiensis L2TR

Gene: IL0273: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
 
CRON 10.
tal
*
Pseudoalteromonas atlantica T6c

Site:
position = -35
score = 5.10573
sequence = TTGTAATTTTACAACAT

Gene: Patl_3622: Transaldolase (EC 2.2.1.2)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_03321: Transaldolase (EC 2.2.1.2)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100002454: Transaldolase (EC 2.2.1.2)
 
Colwellia psychrerythraea 34H
 
Alteromonadales bacterium TW-7
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
Transaldolase (EC 2.2.1.2)
pgi
 
Pseudoalteromonas atlantica T6c

Gene: Patl_3623: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_03322: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100002449: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 2
Colwellia psychrerythraea 34H

Gene: CPS_1020: Glucose-6-phosphate isomerase (EC 5.3.1.9)

Gene: CPS_2108: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Alteromonadales bacterium TW-7

Gene: ATW7_06523: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1139: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 2
Pseudoalteromonas tunicata D2

Gene: PTD2_12559: Glucose-6-phosphate isomerase (EC 5.3.1.9)

Gene: PTD2_17630: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Idiomarina baltica OS145

Gene: OS145_01920: Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
Idiomarina loihiensis L2TR

Gene: IL0570: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Glucose-6-phosphate isomerase (EC 5.3.1.9)
 
CRON 11.
gapB
*
Pseudoalteromonas atlantica T6c

Site:
position = -179
score = 5.07232
sequence = TTGTAGTTAAATTACCA

Gene: Patl_1640: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01258: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Glaciecola sp. HTCC2999

Gene: GHTCC_010100004795: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Colwellia psychrerythraea 34H

Gene: CPS_2344: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Alteromonadales bacterium TW-7

Gene: ATW7_08662: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa1900: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_22397: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Idiomarina baltica OS145

Gene: OS145_06292: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
Idiomarina loihiensis L2TR

Gene: IL1266: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
 
CRON 12.
fba
 
Pseudoalteromonas atlantica T6c
 
Alteromonas macleodii 'Deep ecotype'
 
Glaciecola sp. HTCC2999
*
Colwellia psychrerythraea 34H

Site:
position = -225
score = 4.91223
sequence = TTGTAGTAAACTTACAA

Gene: CPS_3876: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Alteromonadales bacterium TW-7

Gene: ATW7_04007: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Pseudoalteromonas haloplanktis TAC125

Gene: PSHAa0596: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Pseudoalteromonas tunicata D2

Gene: PTD2_13364: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Idiomarina baltica OS145

Gene: OS145_07781: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
 
Idiomarina loihiensis L2TR

Gene: IL2211: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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