Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Pseudoalteromonas atlantica T6c

Properties
Regulator type: Transcription factor
TF locus tag: Patl_0969
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Alteromonadales
Statistics of regulated genes:
- Genes 15
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 38 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -237
Score: 4.8
Sequence: TCGTAATTATACAACAG
Locus tag: Patl_1070
Name: cpsA
Funciton: Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
Patl_1070
cpsA
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
Position: -71
Score: 5.5
Sequence: TTGTAATTTAATTACGG
Locus tag: Patl_2197
Name: glgP
Funciton: Glycogen phosphorylase (EC 2.4.1.1)
Patl_2197
glgP
Glycogen phosphorylase (EC 2.4.1.1)
Position: -190
Score: 5.7
Sequence: TCGTAATTAAATTACGA
Locus tag: Patl_0968
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
Patl_0968
pykA
Pyruvate kinase (EC 2.7.1.40)
Position: -35
Score: 5.1
Sequence: TTGTAATTTTACAACAT
Locus tag: Patl_3622
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
Locus tag: Patl_3623
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Patl_3622
tal
Transaldolase (EC 2.2.1.2)
Patl_3623
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -193
Score: 5.5
Sequence: TAGTAATATAATTACAT
Locus tag: Patl_1744
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
Patl_1744
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -76
Score: 5.3
Sequence: TCGTAATTATATTTCAT
Locus tag: Patl_1634
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: Patl_1633
Name: aldE
Funciton: Predicted aldose 1-epimerase
Patl_1634
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Patl_1633
aldE
Predicted aldose 1-epimerase
Position: -116
Score: 5
Sequence: ACGTTGTAAAATTACAA
Locus tag: Patl_0970
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Patl_0971
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: Patl_0972
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: Patl_0973
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
Locus tag: Patl_0974
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Patl_0970
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Patl_0971
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Patl_0972
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
Patl_0973
glk
Glucokinase (EC 2.7.1.2)
Patl_0974
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -176
Score: 5
Sequence: TTGTAATTTTACAACGT
Locus tag: Patl_0969
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Patl_0969
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family
Position: -179
Score: 5.1
Sequence: TTGTAGTTAAATTACCA
Locus tag: Patl_1640
Name: gapB
Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Patl_1640
gapB
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
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