Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type: Transcription factor
TF locus tag: MADE_01243
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Alteromonadales
Statistics of regulated genes:
- Genes 18
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 38 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -152
Score: 5.3
Sequence: TTGTAATTAATTTACAA
Locus tag: MADE_03951
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
MADE_03951
pckA
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Position: -254
Score: 5.5
Sequence: CTGTAATAAAATTACAA
Locus tag: MADE_02480
Name: cpsA
Funciton: Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
Locus tag: MADE_02481
Name: manC
Funciton: Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
MADE_02480
cpsA
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase
MADE_02481
manC
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)
Position: -276
Score: 5.8
Sequence: TTGTAATTTAATTACAT
Locus tag: MADE_01954
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: MADE_01955
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: MADE_01956
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
MADE_01954
bkdA1
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
MADE_01955
bkdA2
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
MADE_01956
bkdB
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
Position: -42
Score: 4.7
Sequence: ACGTAATTTATTTTCAT
Locus tag: MADE_01250
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: MADE_01249
Name: aldE
Funciton: Predicted aldose 1-epimerase
MADE_01250
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
MADE_01249
aldE
Predicted aldose 1-epimerase
Position: -224
Score: 5.2
Sequence: CTGAAATTAAATTACAA
Locus tag: MADE_00742
Name: ppc
Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
MADE_00742
ppc
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Position: -24
Score: 5.5
Sequence: CTGTAATTAAATTACGT
Locus tag: MADE_02552
Name: glgP
Funciton: Glycogen phosphorylase (EC 2.4.1.1)
MADE_02552
glgP
Glycogen phosphorylase (EC 2.4.1.1)
Position: -98
Score: 5.4
Sequence: CTGTAATAAAATTACGT
Locus tag: MADE_01242
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
MADE_01242
pykA
Pyruvate kinase (EC 2.7.1.40)
Position: -254
Score: 5.3
Sequence: GTGTAATTTTATTACAA
Locus tag: MADE_02382
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
MADE_02382
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -203
Score: 4.6
Sequence: ATGTAATTTTTTGACAA
Position: -108
Score: 5.5
Sequence: TTGTAATTTTACTACAT
Locus tag: MADE_01244
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: MADE_01245
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: MADE_01246
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: MADE_01247
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
Locus tag: MADE_01248
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
MADE_01244
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
MADE_01245
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
MADE_01246
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
MADE_01247
glk
Glucokinase (EC 2.7.1.2)
MADE_01248
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -193
Score: 5.5
Sequence: ATGTAGTAAAATTACAA
Position: -98
Score: 4.6
Sequence: TTGTCAAAAAATTACAT
Locus tag: MADE_01243
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
MADE_01243
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family
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