Regulog NsrR - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - NsrR
- By TF family - Rrf2
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
| Genome | Genes | Operons |
|---|---|---|
| Rhodospirillum rubrum ATCC 11170 | ||
| Magnetospirillum magnetotacticum MS-1 | 2 | 2 |
| Magnetospirillum magneticum AMB-1 | ||
| Azospirillum sp. B510 | ||
| Rhodospirillum centenum SW | ||
| Gluconacetobacter diazotrophicus PAl 5 | 3 | 2 |
| Acetobacter pasteurianus IFO 3283-01 | 3 | 3 |
| Gluconobacter oxydans 621H | 2 | 2 |
| Granulibacter bethesdensis CGDNIH1 | 2 | 2 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| nsrR |
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Magnetospirillum magnetotacticum MS-1 Site: position = -41 score = 4.7544 sequence = GATGCAATTAAAATATACC Site: position = -81 score = 3.97468 sequence = GGTTCATTCGATATGAACC Gene: Magn03002343: Nitrite-sensitive transcriptional repressor NsrR |
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Gluconacetobacter diazotrophicus PAl 5 Site: position = -65 score = 4.67978 sequence = GATGTAAAAACGATGCATC Gene: Gdia_1513: Nitrite-sensitive transcriptional repressor NsrR |
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Acetobacter pasteurianus IFO 3283-01 Site: position = -31 score = 4.93894 sequence = GATGTGTTTTTAAGGCATC Gene: APA01_05530: Nitrite-sensitive transcriptional repressor NsrR |
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Gluconobacter oxydans 621H Site: position = -64 score = 5.41547 sequence = GGTTTATTTGAAATACATC Gene: GOX0860: Nitrite-sensitive transcriptional repressor NsrR |
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Granulibacter bethesdensis CGDNIH1 Site: position = -90 score = 5.15579 sequence = AAGGTATATAAAATGCATC Gene: GbCGDNIH1_1673: Nitrite-sensitive transcriptional repressor NsrR |
Nitrite-sensitive transcriptional repressor NsrR |
| CRON 2. | ||||||||||
| hmp |
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Magnetospirillum magnetotacticum MS-1 Site: position = -72 score = 4.7544 sequence = GGTATATTTTAATTGCATC Site: position = -32 score = 3.97468 sequence = GGTTCATATCGAATGAACC Gene: Magn03002344: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
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Gluconacetobacter diazotrophicus PAl 5 Site: position = -32 score = 4.67978 sequence = GATGCATCGTTTTTACATC Gene: Gdia_1514: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
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Acetobacter pasteurianus IFO 3283-01 Site: position = 22 score = 4.38535 sequence = GATGCATCGCATTGACACC Gene: APA01_21890: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
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Gluconobacter oxydans 621H Site: position = -35 score = 5.41547 sequence = GATGTATTTCAAATAAACC Gene: GOX0861: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
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Granulibacter bethesdensis CGDNIH1 Site: position = -62 score = 5.15579 sequence = GATGCATTTTATATACCTT Gene: GbCGDNIH1_1674: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
| PF04343 |
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Gene: Gdia_1515: protein of unknown function DUF488 |
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Acetobacter pasteurianus IFO 3283-01 Site: position = -69 score = 4.93894 sequence = GATGCCTTAAAAACACATC Gene: APA01_05520: protein of unknown function DUF488 |
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protein of unknown function DUF488 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |