Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NsrR - Vibrionales

Properties
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 40 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio vulnificus CMCP6 3 3
Vibrio harveyi ATCC BAA-1116 4 4
Vibrio parahaemolyticus RIMD 2210633 3 3
Vibrio shilonii AK1
Vibrio splendidus LGP32 2 1
Vibrio fischeri ES114 4 4
Vibrio salmonicida LFI1238 4 4
Vibrio angustum S14 5 5
Photobacterium profundum SS9 6 5
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
aox
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -42
score = 5.44
sequence = GTTGTATTTTAAATACAAC

Gene: VIBHAR_00951: Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)
 
Vibrio parahaemolyticus RIMD 2210633
 2
Vibrio shilonii AK1

Gene: VSAK1_25835: Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)

Gene: VSAK1_25840: Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)
 
Vibrio splendidus LGP32
*
Vibrio fischeri ES114

Site:
position = -41
score = 5.33
sequence = GGTGTATTTTAAATGCAAC

Gene: VF_0578: Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)
*
Vibrio salmonicida LFI1238

Site:
position = -39
score = 5.43
sequence = GTTGTATTTTAAATGCAAC

Gene: VSAL_I0677: Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)
*
Vibrio angustum S14

Site:
position = -42
score = 5.5
sequence = CATGTATTATTAATAAATG

Gene: VAS14_04708: Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)
 
Photobacterium profundum SS9
Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-)
 
CRON 2.
norR2
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP1190: Sigma-54 dependent nitrosative stress transcriptional regulator NorR
 
Vibrio shilonii AK1
 
Vibrio splendidus LGP32
 
Vibrio fischeri ES114
 
Vibrio salmonicida LFI1238
*
Vibrio angustum S14

Site:
position = -118
score = 5.08
sequence = CATTCATATGAAATACATC

Gene: VAS14_14734: Sigma-54 dependent nitrosative stress transcriptional regulator NorR
 
Photobacterium profundum SS9

Gene: PBPRB1897: Sigma-54 dependent nitrosative stress transcriptional regulator NorR
Sigma-54 dependent nitrosative stress transcriptional regulator NorR
 
CRON 3.
norV
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6

Gene: VV21343: Anaerobic nitric oxide reductase flavorubredoxin
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
 
Vibrio shilonii AK1

Gene: VSAK1_23834: Anaerobic nitric oxide reductase flavorubredoxin
 
Vibrio splendidus LGP32
 
Vibrio fischeri ES114

Gene: VF_1782: Anaerobic nitric oxide reductase flavorubredoxin
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2199: Anaerobic nitric oxide reductase flavorubredoxin
 
Vibrio angustum S14
*
Photobacterium profundum SS9

Site:
position = -95
score = 5.68
sequence = CATGTATTATTTATACATG

Site:
position = -43
score = 4.57
sequence = CATGCATTCAAAATACGAG

Gene: PBPRA1144: Anaerobic nitric oxide reductase flavorubredoxin
Anaerobic nitric oxide reductase flavorubredoxin
norW
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6

Gene: VV21344: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
 
Vibrio shilonii AK1

Gene: VSAK1_23839: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio splendidus LGP32
 
Vibrio fischeri ES114

Gene: VF_1781: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2200: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
 
Vibrio angustum S14
 
Photobacterium profundum SS9

Gene: PBPRA1143: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-)
tehB
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio vulnificus CMCP6

Gene: VV21345: putative tellurite resistance protein B
 
Vibrio harveyi ATCC BAA-1116
 
Vibrio parahaemolyticus RIMD 2210633
 2
Vibrio shilonii AK1

Gene: VSAK1_17902: putative tellurite resistance protein B

Gene: VSAK1_23844: putative tellurite resistance protein B
 
Vibrio splendidus LGP32

Gene: VS_II0151: putative tellurite resistance protein B
 
Vibrio fischeri ES114

Gene: VF_1779: putative tellurite resistance protein B
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2202: putative tellurite resistance protein B
 
Vibrio angustum S14
*
Photobacterium profundum SS9

Site:
position = -80
score = 5.03
sequence = GATGTATTATTTACACATC

Gene: PBPRA2631: putative tellurite resistance protein B
putative tellurite resistance protein B
 
CRON 4.
hmp
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VCA0183: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio vulnificus CMCP6

Site:
position = -81
score = 4.79
sequence = GATACATTTGAGATACAAC

Site:
position = -56
score = 5.11
sequence = CATGCATTACAGATGCAAC

Gene: VV1_1301: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -62
score = 4.79
sequence = GATACATTTGAGATACAAC

Site:
position = -37
score = 5.43
sequence = CATGCATTACAAATACAAC

Gene: VIBHAR_00087: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -63
score = 4.79
sequence = GATACATTTGAGATACAAC

Site:
position = -38
score = 5.43
sequence = CATGCATTACAAATACAAC

Gene: VP2809: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio shilonii AK1

Gene: VSAK1_23194: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Vibrio splendidus LGP32

Gene: VS_II0564: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio fischeri ES114

Site:
position = -60
score = 5.0
sequence = GATATATTTTAGATACAAC

Site:
position = -35
score = 5.24
sequence = CATACATTATAAATACACC

Gene: VF_2316: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio salmonicida LFI1238

Site:
position = -86
score = 5.0
sequence = GATATATTTTAGATACAAC

Site:
position = -61
score = 5.34
sequence = CATACATTATAAATACAAC

Gene: VSAL_I2770: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Vibrio angustum S14

Site:
position = -33
score = 5.31
sequence = CATATATTACAAATACATC

Gene: VAS14_18799: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Photobacterium profundum SS9

Site:
position = -33
score = 5.05
sequence = GGTGCATTATAAATATAAC

Gene: PBPRA3343: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
CRON 5.
nsrR
 
Vibrio cholerae O1 biovar eltor str. N16961
*
Vibrio vulnificus CMCP6

Site:
position = -93
score = 5.11
sequence = GTTGCATCTGTAATGCATG

Site:
position = -68
score = 4.79
sequence = GTTGTATCTCAAATGTATC

Gene: VV1_1302: Nitrite-sensitive transcriptional repressor NsrR
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -93
score = 5.43
sequence = GTTGTATTTGTAATGCATG

Site:
position = -68
score = 4.79
sequence = GTTGTATCTCAAATGTATC

Gene: VIBHAR_00086: Nitrite-sensitive transcriptional repressor NsrR
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -139
score = 5.43
sequence = GTTGTATTTGTAATGCATG

Site:
position = -114
score = 4.79
sequence = GTTGTATCTCAAATGTATC

Gene: VP2808: Nitrite-sensitive transcriptional repressor NsrR
 
Vibrio shilonii AK1
*
Vibrio splendidus LGP32

Site:
position = -41
score = 5.26
sequence = GATTCATAATAAATACATC

Gene: VS_0945: Nitrite-sensitive transcriptional repressor NsrR
*
Vibrio fischeri ES114

Site:
position = -90
score = 5.24
sequence = GGTGTATTTATAATGTATG

Site:
position = -65
score = 5.0
sequence = GTTGTATCTAAAATATATC

Gene: VF_2315: Nitrite-sensitive transcriptional repressor NsrR
*
Vibrio salmonicida LFI1238

Site:
position = -92
score = 5.34
sequence = GTTGTATTTATAATGTATG

Site:
position = -67
score = 5.0
sequence = GTTGTATCTAAAATATATC

Gene: VSAL_I2769: Nitrite-sensitive transcriptional repressor NsrR
*
Vibrio angustum S14

Site:
position = -88
score = 5.31
sequence = GATGTATTTGTAATATATG

Gene: VAS14_18794: Nitrite-sensitive transcriptional repressor NsrR
*
Photobacterium profundum SS9

Site:
position = -88
score = 5.05
sequence = GTTATATTTATAATGCACC

Gene: PBPRA3342: Nitrite-sensitive transcriptional repressor NsrR
Nitrite-sensitive transcriptional repressor NsrR
nnrS
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2330: NnrS protein involved in response to NO
*
Vibrio vulnificus CMCP6

Site:
position = -99
score = 5.6
sequence = GTTGTATTTTTAATGCATC

Gene: VV1_1781: NnrS protein involved in response to NO
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -47
score = 5.66
sequence = CATGTATTTTTTATGCATG

Gene: VIBHAR_03317: NnrS protein involved in response to NO
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -83
score = 5.66
sequence = CATGTATTTTTTATGCATG

Gene: VP2390: NnrS protein involved in response to NO
 
Vibrio shilonii AK1

Gene: VSAK1_10668: NnrS protein involved in response to NO
 2
Vibrio splendidus LGP32

Gene: VS_2426: NnrS protein involved in response to NO

Gene: VS_0946: NnrS protein involved in response to NO
*
Vibrio fischeri ES114

Site:
position = -75
score = 5.66
sequence = CATGCATAAAAAATACATG

Gene: VF_A0439: NnrS protein involved in response to NO
*
Vibrio salmonicida LFI1238

Site:
position = -78
score = 5.66
sequence = CATGCATAAAAAATACATG

Gene: VSAL_II0720: NnrS protein involved in response to NO
*
Vibrio angustum S14

Site:
position = -37
score = 5.67
sequence = CATGTATAATTAATGCATG

Gene: VAS14_11974: NnrS protein involved in response to NO
*
Photobacterium profundum SS9

Site:
position = -48
score = 5.07
sequence = GGTGTATCATTTATGCATG

Gene: PBPRB0907: NnrS protein involved in response to NO
NnrS protein involved in response to NO
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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