Regulog FabR - Pasteurellales
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FabR
- By taxonomy - Pasteurellales
- By TF family - TetR
- By effector - Unsaturated acyl-ACP
- By effector - Unsaturated acyl-CoA
- By pathway - Fatty acid biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | 2 | 2 |
| Aggregatibacter aphrophilus NJ8700 | 3 | 3 |
| Pasteurella multocida subsp. multocida str. Pm70 | 2 | 2 |
| Mannheimia succiniciproducens MBEL55E | 3 | 3 |
| Actinobacillus succinogenes 130Z | 2 | 2 |
| Haemophilus somnus 2336 | ||
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 2 | 2 |
| Haemophilus ducreyi 35000HP | 2 | 2 |
| Haemophilus parasuis SH0165 | 2 | 2 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| fabB |
Gene: HI1533: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -51 score = 4.31864 sequence = AGCTAACAAATGTAAGTC Gene: NT05HA_1266: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
Gene: PM0339: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -60 score = 4.90228 sequence = AGCTAACAAATGTAAGTT Gene: MS1591: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
*
Actinobacillus succinogenes 130Z Site: position = -50 score = 5.68365 sequence = AGCTTACAAGTGTAAGGT Gene: Asuc_0888: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
Gene: HSM_1005: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
|
*
Haemophilus ducreyi 35000HP Site: position = -65 score = 6.26059 sequence = AGCGAACAAGTGTAAGCT Gene: HD0612: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
Gene: HAPS_2156: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
| CRON 2. | ||||||||||
| fabA |
*
Haemophilus influenzae Rd KW20 Site: position = -96 score = 5.67364 sequence = TGCGAACAAGTGTTAGCT Gene: HI1325: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -101 score = 6.19907 sequence = GGCGTACAAGTGTTAGCT Gene: NT05HA_0871: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -98 score = 6.07055 sequence = AGCTTACAAGTGTTAGCT Gene: PM0484: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -111 score = 5.49391 sequence = AGCGAACACTTGTTAGCT Gene: MS1194: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Actinobacillus succinogenes 130Z Site: position = -107 score = 5.9994 sequence = AGCGTACATGTGTTAGCT Gene: Asuc_1443: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
Gene: HSM_1385: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -98 score = 5.4528 sequence = AGCGAACAGTTGTTCGCT Gene: APP7_1976: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Haemophilus ducreyi 35000HP Site: position = -98 score = 5.14821 sequence = AGCTAACAGTTGTTAGCT Gene: HD0181: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Haemophilus parasuis SH0165 Site: position = -109 score = 5.98043 sequence = AGCTTACAACTGTTAGCT Gene: HAPS_2242: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
| CRON 3. | ||||||||||
| lcfH |
*
Haemophilus influenzae Rd KW20 Site: position = -20 score = 5.72569 sequence = AGCGCACAACTGTTCGCT Gene: HI0002: putative long-chain-fatty-acid--CoA ligase |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -36 score = 5.68147 sequence = AGCGCACAACTGTTAGCT Gene: NT05HA_0066: putative long-chain-fatty-acid--CoA ligase |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -56 score = 6.00022 sequence = AGCTAACAAGTGTAAGCT Gene: PM0925: putative long-chain-fatty-acid--CoA ligase |
*
Mannheimia succiniciproducens MBEL55E Site: position = -44 score = 5.43547 sequence = AGCGTACAAATGTAAACT Gene: MS2265: putative long-chain-fatty-acid--CoA ligase |
|
|
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -41 score = 5.60532 sequence = AGCGAACAGTTGTAAGCT Gene: APP7_1520: putative long-chain-fatty-acid--CoA ligase |
|
*
Haemophilus parasuis SH0165 Site: position = -90 score = 4.68531 sequence = AGCTTACATTTGTTCGCA Site: position = -37 score = 5.41477 sequence = AGCGAACATTTGTAAGCT Gene: HAPS_1695: putative long-chain-fatty-acid--CoA ligase |
putative long-chain-fatty-acid--CoA ligase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |