Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog FabR - Pasteurellales

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 2 2
Aggregatibacter aphrophilus NJ8700 3 3
Pasteurella multocida subsp. multocida str. Pm70 2 2
Mannheimia succiniciproducens MBEL55E 3 3
Actinobacillus succinogenes 130Z 2 2
Haemophilus somnus 2336
Actinobacillus pleuropneumoniae serovar 7 str. AP76 2 2
Haemophilus ducreyi 35000HP 2 2
Haemophilus parasuis SH0165 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fabB
 
Haemophilus influenzae Rd KW20

Gene: HI1533: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -51
score = 4.31864
sequence = AGCTAACAAATGTAAGTC

Gene: NT05HA_1266: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
 
Pasteurella multocida subsp. multocida str. Pm70

Gene: PM0339: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -60
score = 4.90228
sequence = AGCTAACAAATGTAAGTT

Gene: MS1591: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
*
Actinobacillus succinogenes 130Z

Site:
position = -50
score = 5.68365
sequence = AGCTTACAAGTGTAAGGT

Gene: Asuc_0888: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
 
Haemophilus somnus 2336

Gene: HSM_1005: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76
*
Haemophilus ducreyi 35000HP

Site:
position = -65
score = 6.26059
sequence = AGCGAACAAGTGTAAGCT

Gene: HD0612: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
 
Haemophilus parasuis SH0165

Gene: HAPS_2156: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
 
CRON 2.
fabA
*
Haemophilus influenzae Rd KW20

Site:
position = -96
score = 5.67364
sequence = TGCGAACAAGTGTTAGCT

Gene: HI1325: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -101
score = 6.19907
sequence = GGCGTACAAGTGTTAGCT

Gene: NT05HA_0871: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -98
score = 6.07055
sequence = AGCTTACAAGTGTTAGCT

Gene: PM0484: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -111
score = 5.49391
sequence = AGCGAACACTTGTTAGCT

Gene: MS1194: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Actinobacillus succinogenes 130Z

Site:
position = -107
score = 5.9994
sequence = AGCGTACATGTGTTAGCT

Gene: Asuc_1443: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
 
Haemophilus somnus 2336

Gene: HSM_1385: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -98
score = 5.4528
sequence = AGCGAACAGTTGTTCGCT

Gene: APP7_1976: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Haemophilus ducreyi 35000HP

Site:
position = -98
score = 5.14821
sequence = AGCTAACAGTTGTTAGCT

Gene: HD0181: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Haemophilus parasuis SH0165

Site:
position = -109
score = 5.98043
sequence = AGCTTACAACTGTTAGCT

Gene: HAPS_2242: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
 
CRON 3.
lcfH
*
Haemophilus influenzae Rd KW20

Site:
position = -20
score = 5.72569
sequence = AGCGCACAACTGTTCGCT

Gene: HI0002: putative long-chain-fatty-acid--CoA ligase
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -36
score = 5.68147
sequence = AGCGCACAACTGTTAGCT

Gene: NT05HA_0066: putative long-chain-fatty-acid--CoA ligase
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -56
score = 6.00022
sequence = AGCTAACAAGTGTAAGCT

Gene: PM0925: putative long-chain-fatty-acid--CoA ligase
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -44
score = 5.43547
sequence = AGCGTACAAATGTAAACT

Gene: MS2265: putative long-chain-fatty-acid--CoA ligase
 
Actinobacillus succinogenes 130Z
 
Haemophilus somnus 2336
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -41
score = 5.60532
sequence = AGCGAACAGTTGTAAGCT

Gene: APP7_1520: putative long-chain-fatty-acid--CoA ligase
 
Haemophilus ducreyi 35000HP
*
Haemophilus parasuis SH0165

Site:
position = -90
score = 4.68531
sequence = AGCTTACATTTGTTCGCA

Site:
position = -37
score = 5.41477
sequence = AGCGAACATTTGTAAGCT

Gene: HAPS_1695: putative long-chain-fatty-acid--CoA ligase
putative long-chain-fatty-acid--CoA ligase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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