Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YfmP - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Metal efflux
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 7 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 2 1
Bacillus amyloliquefaciens FZB42 2 1
Bacillus pumilus SAFR-032 2 1
Bacillus licheniformis DSM 13 2 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579 2 1
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2 3 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yfmP
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -68
score = 7.00473
sequence = AACTTAACGTTTACGTTAAGGT

Gene: BSU07390: transcriptional regulator of metal efflux transporter expression, MerR family
*
Bacillus amyloliquefaciens FZB42

Site:
position = -69
score = 6.86154
sequence = AAGTTTACGTTTACGTTAAGGT

Gene: RBAM_007640: transcriptional regulator of metal efflux transporter expression, MerR family
*
Bacillus pumilus SAFR-032

Site:
position = -71
score = 6.64578
sequence = ACATTTACGTTTACGTTAAGGT

Gene: BPUM_0692: transcriptional regulator of metal efflux transporter expression, MerR family
*
Bacillus licheniformis DSM 13

Site:
position = -65
score = 6.7612
sequence = AACTTAACGTTTACGTAAAAGT

Gene: BLi00773: transcriptional regulator of metal efflux transporter expression, MerR family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
*
Bacillus cereus ATCC 14579

Site:
position = -50
score = 6.49505
sequence = AAGTTAACGTTAACGTAAAATG

Gene: BC5373: transcriptional regulator of metal efflux transporter expression, MerR family
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -69
score = 6.52741
sequence = AAGTTAACGTTGACGTTAACAT

Gene: Pjdr2_6009: transcriptional regulator of metal efflux transporter expression, MerR family
Transcriptional regulator of metal efflux transporter expression, MerR family
yfmO
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU07400: Metal efflux transporter, MFS_1 family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_007650: Metal efflux transporter, MFS_1 family
 
Bacillus pumilus SAFR-032

Gene: BPUM_0693: Metal efflux transporter, MFS_1 family
 
Bacillus licheniformis DSM 13

Gene: BLi00774: Metal efflux transporter, MFS_1 family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK0376: Metal efflux transporter, MFS_1 family
 
Bacillus cereus ATCC 14579

Gene: BC5372: Metal efflux transporter, MFS_1 family
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
*2
Paenibacillus sp. JDR-2

Gene: Pjdr2_6008: Metal efflux transporter, MFS_1 family

Site:
position = -107
score = 6.45287
sequence = AAGTTAACGTTGACGTAAAGAT

Gene: Pjdr2_1878: Metal efflux transporter, MFS_1 family
Metal efflux transporter, MFS_1 family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise