Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YisR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Metabolite transport
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 1 1
Bacillus amyloliquefaciens FZB42 1 1
Bacillus pumilus SAFR-032 1 1
Bacillus licheniformis DSM 13 1 1
Anoxybacillus flavithermus WK1 1 1
Geobacillus kaustophilus HTA426 1 1
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yisQ
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -106
score = 7.10442
sequence = TTAAGTCGGATTTTTACAAG

Gene: BSU10820: Na+-driven multidrug efflux pump, MATE family
*
Bacillus amyloliquefaciens FZB42

Site:
position = -105
score = 6.9926
sequence = TTAAGTCGGATTTTTGCAAG

Gene: RBAM_010970: Na+-driven multidrug efflux pump, MATE family
*
Bacillus pumilus SAFR-032

Site:
position = -100
score = 6.73818
sequence = TGAAGTCGGATTTCTCCAAT

Gene: BPUM_1013: Na+-driven multidrug efflux pump, MATE family
*
Bacillus licheniformis DSM 13

Site:
position = -103
score = 6.9213
sequence = TCAAGTCGGATTTCTCCAAG

Gene: BLi01177: Na+-driven multidrug efflux pump, MATE family
*
Anoxybacillus flavithermus WK1

Site:
position = -101
score = 6.33832
sequence = TTAAGTCGGAAATGTACAAA

Gene: Aflv_2194: Na+-driven multidrug efflux pump, MATE family
*
Geobacillus kaustophilus HTA426

Site:
position = -34
score = 5.3956
sequence = TCAAGTCGGAATTTGAAAAA

Gene: GK0701: Na+-driven multidrug efflux pump, MATE family
 
Bacillus cereus ATCC 14579

Gene: BC1184: Na+-driven multidrug efflux pump, MATE family
 
Bacillus halodurans C-125

Gene: BH2936: Na+-driven multidrug efflux pump, MATE family
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 4
Paenibacillus sp. JDR-2

Gene: Pjdr2_5442: Na+-driven multidrug efflux pump, MATE family

Gene: Pjdr2_0422: Na+-driven multidrug efflux pump, MATE family

Gene: Pjdr2_5956: Na+-driven multidrug efflux pump, MATE family

Gene: Pjdr2_6233: Na+-driven multidrug efflux pump, MATE family
Na+-driven multidrug efflux pump, MATE family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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