Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YdfL - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 1 1
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13 1 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579 1 1
Bacillus halodurans C-125 1 1
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
BH0429
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi02238: Putative trasporter
 
Anoxybacillus flavithermus WK1
 2
Geobacillus kaustophilus HTA426

Gene: GK2882: Putative trasporter

Gene: GK1717: Putative trasporter
 
Bacillus cereus ATCC 14579
*2
Bacillus halodurans C-125

Site:
position = -63
score = 6.34631
sequence = GACTCTCCCCTTACTGGAGGGTT

Gene: BH3495: Putative trasporter

Gene: BH0429: Putative trasporter
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative trasporter
 
CRON 2.
ydfK
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -62
score = 5.75404
sequence = GACTCTCTACTAACTAGAGGGTT

Gene: BSU05450: Putative integral inner membrane protein
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative integral inner membrane protein
 
CRON 3.
BC1615
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
*
Bacillus licheniformis DSM 13

Site:
position = -58
score = 6.15489
sequence = GACCTTCAAGTAACTTGAAGGTT

Gene: BLi02817: Na+ driven multidrug efflux pump
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
*
Bacillus cereus ATCC 14579

Site:
position = -66
score = 6.26377
sequence = GACCTTCAAGTTACTTGAAGGTT

Gene: BC1615: Na+ driven multidrug efflux pump
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC1246: Na+ driven multidrug efflux pump
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Na+ driven multidrug efflux pump
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD