Regulog YdfL - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	activator
Biological process:	Multidrug resistance
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - MerR
By pathway - Multidrug resistance

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	1	1
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13	1	1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579	1	1
Bacillus halodurans C-125	1	1
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
BH0429	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi02238: Putative trasporter	Anoxybacillus flavithermus WK1	2 Geobacillus kaustophilus HTA426 Gene: GK2882: Putative trasporter Gene: GK1717: Putative trasporter	Bacillus cereus ATCC 14579	2 Bacillus halodurans C-125* Site: position = -63 score = 6.34631 sequence = GACTCTCCCCTTACTGGAGGGTT Gene: BH3495: Putative trasporter Gene: BH0429: Putative trasporter	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative trasporter

CRON 2.
ydfK	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -62 score = 5.75404 sequence = GACTCTCTACTAACTAGAGGGTT Gene: BSU05450: Putative integral inner membrane protein	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative integral inner membrane protein

CRON 3.
BC1615	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -58 score = 6.15489 sequence = GACCTTCAAGTAACTTGAAGGTT Gene: BLi02817: Na+ driven multidrug efflux pump	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -66 score = 6.26377 sequence = GACCTTCAAGTTACTTGAAGGTT Gene: BC1615: Na+ driven multidrug efflux pump	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1246: Na+ driven multidrug efflux pump	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Na+ driven multidrug efflux pump

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog YdfL - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --