Regulog NagR - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine-6-phosphate
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 14 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By trascription factor - NagR
By TF family - GntR/Others
By effector - N-acetylglucosamine-6-phosphate
By pathway - N-acetylglucosamine utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	4	2
Bacillus amyloliquefaciens FZB42	4	2
Bacillus pumilus SAFR-032	4	2
Bacillus licheniformis DSM 13	5	1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426	3	1
Bacillus cereus ATCC 14579	3	1
Bacillus halodurans C-125	4	3
Bacillus clausii KSM-K16	2	1
Oceanobacillus iheyensis HTE831	1	1
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
nagA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -72 score = 5.59833 sequence = CAGCTGGTCTAGATCACTAG Gene: BSU35010: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	* Bacillus amyloliquefaciens FZB42 Site: position = -73 score = 6.19627 sequence = TAACTGGTCTAGATAACTAG Gene: RBAM_032200: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	* Bacillus pumilus SAFR-032 Site: position = -71 score = 5.7598 sequence = TTACTGGTATAGACAACTAT Gene: BPUM_3138: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	* Bacillus licheniformis DSM 13 Site: position = -72 score = 6.13355 sequence = TTATTGGTCTAGACAACTAG Gene: BLi04348: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -63 score = 5.8252 sequence = TTAGTGGTATAGACAACTAG Gene: GK2277: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	* Bacillus cereus ATCC 14579 Site: position = -99 score = 6.35911 sequence = TAGAATGTATAGACAACTAC Gene: BC4055: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	* Bacillus halodurans C-125 Site: position = -157 score = 5.24465 sequence = AAATTGGTATATACAAATTA Gene: BH0421: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	* Bacillus clausii KSM-K16 Site: position = -79 score = 6.46793 sequence = TAATTGGTATAGACAACTAA Gene: ABC1489: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Oceanobacillus iheyensis HTE831 Gene: OB2907: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Paenibacillus sp. JDR-2	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU35020: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_032210: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Bacillus pumilus SAFR-032 Gene: BPUM_3139: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Bacillus licheniformis DSM 13 Gene: BLi04349: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK2276: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Bacillus cereus ATCC 14579 Gene: BC4054: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Bacillus halodurans C-125 Gene: BH0420: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Bacillus clausii KSM-K16 Gene: ABC1490: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	* Oceanobacillus iheyensis HTE831 Site: position = -55 score = 5.35625 sequence = TAACATGTATAGACAACTGT Gene: OB0611: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Paenibacillus sp. JDR-2	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nagR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU35030: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Bacillus amyloliquefaciens FZB42 Gene: RBAM_032220: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Bacillus pumilus SAFR-032 Gene: BPUM_3140: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Bacillus licheniformis DSM 13 Gene: BLi04350: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK2275: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Bacillus cereus ATCC 14579 Gene: BC4053: Transcriptional regulator of N-acetylglucosamine utilization, GntR	* Bacillus halodurans C-125 Site: position = -153 score = 5.04732 sequence = TAATTGGTATAGACATTTTA Gene: BH0419: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Bacillus clausii KSM-K16 Gene: ABC1488: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Oceanobacillus iheyensis HTE831 Gene: OB0612: Transcriptional regulator of N-acetylglucosamine utilization, GntR	Paenibacillus sp. JDR-2	Transcriptional regulator of N-acetylglucosamine utilization, GntR
murQ2	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi04351: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
nagP	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -68 score = 5.75084 sequence = AAATTGGTATAGATCACTAG Gene: BSU07700: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	* Bacillus amyloliquefaciens FZB42 Site: position = -66 score = 5.75084 sequence = AAATTGGTATAGATCACTAG Gene: RBAM_007900: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	* Bacillus pumilus SAFR-032 Site: position = -87 score = 6.0635 sequence = AAATTGGTATAGATAACTAG Gene: BPUM_0720: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Bacillus licheniformis DSM 13 Gene: BLi04352: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0482: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	* Bacillus halodurans C-125 Site: position = -94 score = 6.38082 sequence = TAATAGGTATAGACAACTAA Gene: BH0422: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2009: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NagR - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --