Regulog NagR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - NagR
- By TF family - GntR/Others
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 4 | 2 |
| Bacillus amyloliquefaciens FZB42 | 4 | 2 |
| Bacillus pumilus SAFR-032 | 4 | 2 |
| Bacillus licheniformis DSM 13 | 5 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | 3 | 1 |
| Bacillus cereus ATCC 14579 | 3 | 1 |
| Bacillus halodurans C-125 | 4 | 3 |
| Bacillus clausii KSM-K16 | 2 | 1 |
| Oceanobacillus iheyensis HTE831 | 1 | 1 |
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| nagA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -72 score = 5.59833 sequence = CAGCTGGTCTAGATCACTAG Gene: BSU35010: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Bacillus amyloliquefaciens FZB42 Site: position = -73 score = 6.19627 sequence = TAACTGGTCTAGATAACTAG Gene: RBAM_032200: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Bacillus pumilus SAFR-032 Site: position = -71 score = 5.7598 sequence = TTACTGGTATAGACAACTAT Gene: BPUM_3138: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Bacillus licheniformis DSM 13 Site: position = -72 score = 6.13355 sequence = TTATTGGTCTAGACAACTAG Gene: BLi04348: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|
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Geobacillus kaustophilus HTA426 Site: position = -63 score = 5.8252 sequence = TTAGTGGTATAGACAACTAG Gene: GK2277: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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Bacillus cereus ATCC 14579 Site: position = -99 score = 6.35911 sequence = TAGAATGTATAGACAACTAC Gene: BC4055: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
*
Bacillus halodurans C-125 Site: position = -157 score = 5.24465 sequence = AAATTGGTATATACAAATTA Gene: BH0421: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
*
Bacillus clausii KSM-K16 Site: position = -79 score = 6.46793 sequence = TAATTGGTATAGACAACTAA Gene: ABC1489: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
Gene: OB2907: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| nagB |
Gene: BSU35020: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: RBAM_032210: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BPUM_3139: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BLi04349: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
|
Gene: GK2276: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BC4054: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: BH0420: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: ABC1490: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
*
Oceanobacillus iheyensis HTE831 Site: position = -55 score = 5.35625 sequence = TAACATGTATAGACAACTGT Gene: OB0611: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
|
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
| nagR |
Gene: BSU35030: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
Gene: RBAM_032220: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
Gene: BPUM_3140: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
Gene: BLi04350: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
|
Gene: GK2275: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
Gene: BC4053: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
*
Bacillus halodurans C-125 Site: position = -153 score = 5.04732 sequence = TAATTGGTATAGACATTTTA Gene: BH0419: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
Gene: ABC1488: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
Gene: OB0612: Transcriptional regulator of N-acetylglucosamine utilization, GntR |
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Transcriptional regulator of N-acetylglucosamine utilization, GntR |
| murQ2 |
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Gene: BLi04351: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
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N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) |
| nagP |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -68 score = 5.75084 sequence = AAATTGGTATAGATCACTAG Gene: BSU07700: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -66 score = 5.75084 sequence = AAATTGGTATAGATCACTAG Gene: RBAM_007900: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Bacillus pumilus SAFR-032 Site: position = -87 score = 6.0635 sequence = AAATTGGTATAGATAACTAG Gene: BPUM_0720: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Gene: BLi04352: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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Gene: BC0482: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
*
Bacillus halodurans C-125 Site: position = -94 score = 6.38082 sequence = TAATAGGTATAGACAACTAA Gene: BH0422: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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Gene: Pjdr2_2009: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |