Regulog GmuR - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Glucomannan utilization
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - GntR/Others
By pathway - Glucomannan utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	8	1
Bacillus amyloliquefaciens FZB42	7	1
Bacillus pumilus SAFR-032	5	1
Bacillus licheniformis DSM 13	6	1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426	5	1
Bacillus cereus ATCC 14579
Bacillus halodurans C-125	6	1
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
gmuB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -74 score = 6.88117 sequence = TAAAAGTATAGACATTTA Gene: BSU05810: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	* Bacillus amyloliquefaciens FZB42 Site: position = -78 score = 6.88117 sequence = TAAAAGTATAGACATTTA Gene: RBAM_035870: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	* Bacillus pumilus SAFR-032 Site: position = -78 score = 6.88117 sequence = TAAATGTCTAGACATTTA Gene: BPUM_2121: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	* Bacillus licheniformis DSM 13 Site: position = -79 score = 6.88117 sequence = TAAATGTCTAGACATTTA Gene: BLi02564: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -91 score = 6.07636 sequence = TAAATGACTAGACAAATA Gene: GK1859: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -81 score = 6.88117 sequence = TAAAAGTATAGACATTTA Gene: BH3921: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	Bacillus clausii KSM-K16 Gene: ABC0481: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	Oceanobacillus iheyensis HTE831 Gene: OB2760: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)	Paenibacillus sp. JDR-2	Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
gmuA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05820: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035880: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)	Bacillus pumilus SAFR-032 Gene: BPUM_2120: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)	Bacillus licheniformis DSM 13 Gene: BLi02563: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1858: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3920: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
gmuC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05830: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035890: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	Bacillus pumilus SAFR-032 Gene: BPUM_2119: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	2 Bacillus licheniformis DSM 13 Gene: BLi02561: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) Gene: BLi02562: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1857: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3919: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	Bacillus clausii KSM-K16 Gene: ABC0482: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	2 Oceanobacillus iheyensis HTE831 Gene: OB2761: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) Gene: OB0781: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)	Paenibacillus sp. JDR-2	Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
gmuD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05840: 6-phospho-beta-glucosidase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035900: 6-phospho-beta-glucosidase	Bacillus pumilus SAFR-032 Gene: BPUM_2118: 6-phospho-beta-glucosidase	Bacillus licheniformis DSM 13 Gene: BLi02560: 6-phospho-beta-glucosidase	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1856: 6-phospho-beta-glucosidase	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3918: 6-phospho-beta-glucosidase	Bacillus clausii KSM-K16 Gene: ABC0315: 6-phospho-beta-glucosidase	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	6-phospho-beta-glucosidase
gmuR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05850: Transcriptional regulator of glucomannan utilization, GntR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_006170: Transcriptional regulator of glucomannan utilization, GntR family	Bacillus pumilus SAFR-032 Gene: BPUM_2117: Transcriptional regulator of glucomannan utilization, GntR family	Bacillus licheniformis DSM 13 Gene: BLi02559: Transcriptional regulator of glucomannan utilization, GntR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1855: Transcriptional regulator of glucomannan utilization, GntR family	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3917: Transcriptional regulator of glucomannan utilization, GntR family	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of glucomannan utilization, GntR family
gmuE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05860: Predicted mannokinase (EC 2.7.1.7)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035910: Predicted mannokinase (EC 2.7.1.7)	Bacillus pumilus SAFR-032 Gene: BPUM_3005: Predicted mannokinase (EC 2.7.1.7)	Bacillus licheniformis DSM 13 Gene: BLi03529: Predicted mannokinase (EC 2.7.1.7)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted mannokinase (EC 2.7.1.7)
gmuF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05870: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035920: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3916: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Mannose-6-phosphate isomerase (EC 5.3.1.8)
gmuG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU05880: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035930: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00735: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog GmuR - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --