Regulog GmuR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucomannan utilization |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - GntR/Others
- By pathway - Glucomannan utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 8 | 1 |
| Bacillus amyloliquefaciens FZB42 | 7 | 1 |
| Bacillus pumilus SAFR-032 | 5 | 1 |
| Bacillus licheniformis DSM 13 | 6 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | 5 | 1 |
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | 6 | 1 |
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| gmuB |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -74 score = 6.88117 sequence = TAAAAGTATAGACATTTA Gene: BSU05810: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
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Bacillus amyloliquefaciens FZB42 Site: position = -78 score = 6.88117 sequence = TAAAAGTATAGACATTTA Gene: RBAM_035870: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
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Bacillus pumilus SAFR-032 Site: position = -78 score = 6.88117 sequence = TAAATGTCTAGACATTTA Gene: BPUM_2121: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
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Bacillus licheniformis DSM 13 Site: position = -79 score = 6.88117 sequence = TAAATGTCTAGACATTTA Gene: BLi02564: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
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Geobacillus kaustophilus HTA426 Site: position = -91 score = 6.07636 sequence = TAAATGACTAGACAAATA Gene: GK1859: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
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Bacillus halodurans C-125 Site: position = -81 score = 6.88117 sequence = TAAAAGTATAGACATTTA Gene: BH3921: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
Gene: ABC0481: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
Gene: OB2760: Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
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Glucomannan-related PTS system, IIB component (EC 2.7.1.69) |
| gmuA |
Gene: BSU05820: Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
Gene: RBAM_035880: Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
Gene: BPUM_2120: Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
Gene: BLi02563: Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
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Gene: GK1858: Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
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Gene: BH3920: Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
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Glucomannan-related PTS system, IIA component (EC 2.7.1.69) |
| gmuC |
Gene: BSU05830: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
Gene: RBAM_035890: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
Gene: BPUM_2119: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
2
Bacillus licheniformis DSM 13 Gene: BLi02561: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) Gene: BLi02562: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
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Gene: GK1857: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
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Gene: BH3919: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
Gene: ABC0482: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
2
Oceanobacillus iheyensis HTE831 Gene: OB2761: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) Gene: OB0781: Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
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Glucomannan-related PTS system, IIC component (EC 2.7.1.69) |
| gmuD |
Gene: BSU05840: 6-phospho-beta-glucosidase |
Gene: RBAM_035900: 6-phospho-beta-glucosidase |
Gene: BPUM_2118: 6-phospho-beta-glucosidase |
Gene: BLi02560: 6-phospho-beta-glucosidase |
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Gene: GK1856: 6-phospho-beta-glucosidase |
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Gene: BH3918: 6-phospho-beta-glucosidase |
Gene: ABC0315: 6-phospho-beta-glucosidase |
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6-phospho-beta-glucosidase |
| gmuR |
Gene: BSU05850: Transcriptional regulator of glucomannan utilization, GntR family |
Gene: RBAM_006170: Transcriptional regulator of glucomannan utilization, GntR family |
Gene: BPUM_2117: Transcriptional regulator of glucomannan utilization, GntR family |
Gene: BLi02559: Transcriptional regulator of glucomannan utilization, GntR family |
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Gene: GK1855: Transcriptional regulator of glucomannan utilization, GntR family |
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Gene: BH3917: Transcriptional regulator of glucomannan utilization, GntR family |
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Transcriptional regulator of glucomannan utilization, GntR family |
| gmuE |
Gene: BSU05860: Predicted mannokinase (EC 2.7.1.7) |
Gene: RBAM_035910: Predicted mannokinase (EC 2.7.1.7) |
Gene: BPUM_3005: Predicted mannokinase (EC 2.7.1.7) |
Gene: BLi03529: Predicted mannokinase (EC 2.7.1.7) |
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Predicted mannokinase (EC 2.7.1.7) |
| gmuF |
Gene: BSU05870: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
Gene: RBAM_035920: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
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Gene: BH3916: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
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Mannose-6-phosphate isomerase (EC 5.3.1.8) |
| gmuG |
Gene: BSU05880: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78) |
Gene: RBAM_035930: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78) |
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Gene: BLi00735: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78) |
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Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |