Propagation of NrdR regulog to Shewanella baltica OS185

Reference regulog properties
Source regulog:	NrdR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	NrdR
Regulation mode:	repressor
Biological process:	Deoxyribonucleotide biosynthesis
Effector:	Deoxyribonucleotides
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Shewanella baltica OS185
Orthologous TF(s)	Shew185_3160
Regulated genes	2

Built upon 64 sites [see more]

Predicted regulatory interactions in *Shewanella baltica OS185*
	Locus tag	Position	Score	Sequence
Position: -80 Score: 4.4 Sequence: GCTCTACATATTGTGT Position: -49 Score: 5 Sequence: TCACTAGATGTAGTGT Locus tag: Shew185_1650
	Shew185_1650	-80	4.4	GCTCTACATATTGTGT
		-49	5	TCACTAGATGTAGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Shewanella oneidensis MR-1	SO2834	-79	4.3	TGCCTACATATTGTGT
		-48	5.2	TCACTATATGTAGTGT
Shewanella putrefaciens CN-32	Sputcn32_1540	-79	4.4	ACGCTATATATTGTGC
		-48	5.2	TCACTATATGTAGTGT
Shewanella sp W3-18-1	Sputw3181_2559	-79	4.4	ACGCTATATATTGTGC
		-48	5.2	TCACTATATGTAGTGT
Shewanella sp ANA-3	Shewana3_2603	-79	4.3	TGCCTAGATATTGTGT
		-48	5	GCACTATATGTAGTGT
Shewanella sp MR-4	Shewmr4_2441	-79	4.4	TGCCTAGATATAGTGT
		-48	5.5	ACACTATATGTAGTGT
Shewanella sp MR-7	Shewmr7_2511	-79	4.4	TGCCTACATATAGTGT
		-48	5.5	ACACTATATGTAGTGT
Shewanella baltica OS155	Sbal_1665	-80	4.4	GCTCTACATATTGTGT
		-49	5	TCACTAGATGTAGTGT
Shewanella denitrificans OS217	Sden_1419	-124	4.1	GCACAGCATATTGTGT
		-93	3.6	AgtCTATATgTAGatT
Shewanella frigidimarina NCIMB 400	Sfri_2443	-64	4.7	ACACTCTATCTTGTGT
		-33	4	GCGCTATATATAGTGC
Shewanella amazonensis SB2B	Sama_1275	-72	4.6	ACACTACATTTTGTAT
		-41	4.1	GCTCAACATATAGTGA
Shewanella loihica PV-4	Shew_2449	-80	4.3	GCGCTACATATTGTGT
		-49	5.2	ACACTATATATGGTGT
Shewanella pealeana ATCC 700345	Spea_2619	-81	3.6	gCgCcAcATATtGTGa
		-50	5.1	GCACTATATATAGTGT
Shewanella halifaxensis HAW-EB4	Shal_2692	-81	4.1	ACGCCACATATTGTGA
		-50	5.1	GCACTATATATAGTGT
Shewanella piezotolerans WP3	swp_3165	-80	3.6	gCgCcAcATATtGTGa
		-49	5.3	ATACTATATGTAGTGT
Shewanella sediminis HAW-EB3	Ssed_1600	-80	4.2	ACGCAACATATTGTGC
		-49	5.1	ACACTATATGTGGTGT
Shewanella woodyi ATCC 51908	Swoo_3049	-80	4.2	ACGCAACATATTGTGC
		-49	5.1	ACACTATATGTGGTGT

Position: -172 Score: 5 Sequence: ACACCATATCTTGTGT Locus tag: Shew185_2290
	Shew185_2290	-172	5	ACACCATATCTTGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdA
Ortholog function: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Shewanella oneidensis MR-1	SO2415	-202	3.7	CCTCACTATCTTGTAT
		-171	5	ACACCATATCTTGTGT
Shewanella putrefaciens CN-32	Sputcn32_2073	-202	3.7	CCTCACTATCTTGTAT
		-171	5	ACACCATATCTTGTGT
Shewanella sp W3-18-1	Sputw3181_1939	-202	3.7	CCTCACTATCTTGTAT
		-171	5	ACACCATATCTTGTGT
Shewanella sp ANA-3	Shewana3_1969	-202	3.7	CCTCACTATCTTGTAT
		-171	5	ACACCATATCTTGTGT
Shewanella sp MR-4	Shewmr4_1916	-202	3.7	CCTCACTATCTTGTAT
		-171	5	ACACCATATCTTGTGT
Shewanella sp MR-7	Shewmr7_2062	-202	3.7	CCTCACTATCTTGTAT
		-171	5	ACACCATATCTTGTGT
Shewanella baltica OS155	Sbal_2059	-203	3.7	CCTCACTATCTTGTAT
		-172	5	ACACCATATCTTGTGT
Shewanella denitrificans OS217	Sden_1952	-336	3.7	ACTCACTATCTTGTAG
		-304	5.4	ACACTATATCTTGTGT
Shewanella frigidimarina NCIMB 400	Sfri_2133	-254	3.7	CCTCACTATCTTGTAT
		-223	5	ACACCATATCTTGTGT
Shewanella amazonensis SB2B	Sama_1728	-126	3.7	CCTCACTATCTTGTAT
		-95	4.4	GCACCATATCTTGTGT
Shewanella loihica PV-4	Shew_1946	-180	3.7	CCTCACTATCTTGTAT
		-149	5	ACACCATATCTTGTGT
Shewanella pealeana ATCC 700345	Spea_2064	-165	5.2	ACACCATATATAGTGT
		-163	4.2	ACCATATATAGTGTGT
Shewanella halifaxensis HAW-EB4	Shal_2036	-165	5.2	ACACCATATATAGTGT
		-163	4.2	ACCATATATAGTGTGT
Shewanella piezotolerans WP3	swp_2478	-50	3.9	AAACACCATATATTGT
		-48	5.1	ACACCATATATTGTGT
Shewanella sediminis HAW-EB3	Ssed_2306	-164	5.2	ACACCATATATAGTGT
		-162	4.2	ACCATATATAGTGTGT
Shewanella woodyi ATCC 51908	Swoo_2303	-165	5.2	ACACCATATATAGTGT
		-163	4.2	ACCATATATAGTGTGT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NrdR regulog to Shewanella baltica OS185

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --