Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SO3393 regulog to Shewanella piezotolerans WP3

Reference regulog properties
Source regulog: SO3393 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Drug resistance
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella piezotolerans WP3
Orthologous TF(s) swp_0976
Regulated genes 1
Built upon 78 sites [see more]
Predicted regulatory interactions in Shewanella piezotolerans WP3
Locus tag Position Score Sequence
Position: -2
Score: 7
Sequence: TCTTGAATGAACATTCAAGA
Locus tag: swp_0976
swp_0976 -2 7 TCTTGAATGAACATTCAAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3393
Ortholog function: Transcriptional regulator, TetR family
Shewanella oneidensis MR-1 SO_3393 -115 7 TCTTGAATGTACGTTCAAGA
-88 5.8 ATTTGAATGATCATTCAAGA
-64 5.5 TTTTGAATGTTTGTTCAATA
Shewanella putrefaciens CN-32 Sputcn32_2721 -119 7.2 TCTTGAATGTGCATTCAAGA
-92 5.4 ATTTGAATGAACATTCAAGT
-68 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp W3-18-1 Sputw3181_1291 -119 7.2 TCTTGAATGTGCATTCAAGA
-92 5.4 ATTTGAATGAACATTCAAGT
-68 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp ANA-3 Shewana3_1158 -114 7.2 TCTTGAATGTGCATTCAAGA
-87 5.5 ATTTGAACGATCATTCAAGA
-63 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp MR-4 Shewmr4_1157 -115 7.2 TCTTGAATGTGCATTCAAGA
-88 5.5 ATTTGAACGATCATTCAAGA
-64 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp MR-7 Shewmr7_1228 -115 7 TCTTGAATATGCATTCAAGA
-88 5.5 ATTTGAACGATCATTCAAGA
-64 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella baltica OS155 Sbal_1248 -119 7 TCTTGAATATGCATTCAAGA
-92 5 ATTTGAACGATCATTCAAGT
-68 6 TTTTGAATGTTCATTCAAAA
Shewanella denitrificans OS217 Sden_1229 14 7.2 TCTTGAATGTGCATTCAAGA
41 5 ATTTGAACATTCATTCAAGT
Shewanella frigidimarina NCIMB 400 Sfri_1088 -131 7 TCTTGAATATGCATTCAAGA
-103 5.6 AATTGAATGCACATTCAAGT
Shewanella amazonensis SB2B Sama_2408 -113 5.2 TTTTGAACAGGCATTCAAAA
-86 6.8 TCTTGAACATACATTCAAGA
-62 5.7 TTTTGAACATACATTCAAAA
Shewanella loihica PV-4 Shew_3099 -118 6.7 TCTTGAATGAGCGTTCAAGA
-67 5.8 TTTTGAACGTTCATTCAAAA
Shewanella piezotolerans WP3 swp_0976 -2 7 TCTTGAATGAACATTCAAGA
25 5 ATTTGAATAATCATTCAAGT
49 5.5 TTTTGAACAAACATTCAAAA
Shewanella sediminis HAW-EB3 Ssed_3643 -128 7 TCTTGAATGTTCATTCAAGA
-101 5 ATTTGAACGATCATTCAAGT
-77 5.5 TTTTGAACAAACATTCAAAA
Shewanella woodyi ATCC 51908 Swoo_4056 -113 7 TCTTGAATGTTCATTCAAGA
-86 5 ATTTGAACGATCATTCAAGT
-62 5.5 TTTTGAACAAACATTCAAAA
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