Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3393 gene

Properties
Regulog: SO3393 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Drug resistance
Effector:
Phylum: Proteobacteria/gamma
Built upon 78 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -113
Score: 5.21036
Sequence: TTTTGAACAGGCATTCAAAA
Position: -86
Score: 6.82413
Sequence: TCTTGAACATACATTCAAGA
Position: -62
Score: 5.74735
Sequence: TTTTGAACATACATTCAAAA
Locus tag: Sama_2408
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -113 5.2 TTTTGAACAGGCATTCAAAA Sama_2408
-86 6.8 TCTTGAACATACATTCAAGA
-62 5.7 TTTTGAACATACATTCAAAA
Shewanella baltica OS155
Position: -119
Score: 6.95225
Sequence: TCTTGAATATGCATTCAAGA
Position: -92
Score: 5.00085
Sequence: ATTTGAACGATCATTCAAGT
Position: -68
Score: 5.96658
Sequence: TTTTGAATGTTCATTCAAAA
Locus tag: Sbal_1248
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -119 7 TCTTGAATATGCATTCAAGA Sbal_1248
-92 5 ATTTGAACGATCATTCAAGT
-68 6 TTTTGAATGTTCATTCAAAA
Shewanella denitrificans OS217
Position: 14
Score: 7.16778
Sequence: TCTTGAATGTGCATTCAAGA
Position: 41
Score: 4.99714
Sequence: ATTTGAACATTCATTCAAGT
Locus tag: Sden_1229
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 14 7.2 TCTTGAATGTGCATTCAAGA Sden_1229
41 5 ATTTGAACATTCATTCAAGT
Shewanella frigidimarina NCIMB 400
Position: -131
Score: 6.95225
Sequence: TCTTGAATATGCATTCAAGA
Position: -103
Score: 5.55261
Sequence: AATTGAATGCACATTCAAGT
Locus tag: Sfri_1088
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -131 7 TCTTGAATATGCATTCAAGA Sfri_1088
-103 5.6 AATTGAATGCACATTCAAGT
Shewanella loihica PV-4
Position: -118
Score: 6.74044
Sequence: TCTTGAATGAGCGTTCAAGA
Position: -67
Score: 5.75106
Sequence: TTTTGAACGTTCATTCAAAA
Locus tag: Shew_3099
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -118 6.7 TCTTGAATGAGCGTTCAAGA Shew_3099
-67 5.8 TTTTGAACGTTCATTCAAAA
Shewanella oneidensis MR-1
Position: -115
Score: 7.03966
Sequence: TCTTGAATGTACGTTCAAGA
Position: -88
Score: 5.75477
Sequence: ATTTGAATGATCATTCAAGA
Position: -64
Score: 5.53553
Sequence: TTTTGAATGTTTGTTCAATA
Locus tag: SO_3393
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -115 7 TCTTGAATGTACGTTCAAGA SO_3393
-88 5.8 ATTTGAATGATCATTCAAGA
-64 5.5 TTTTGAATGTTTGTTCAATA
Shewanella piezotolerans WP3
Position: -2
Score: 7.04337
Sequence: TCTTGAATGAACATTCAAGA
Position: 25
Score: 5.00085
Sequence: ATTTGAATAATCATTCAAGT
Position: 49
Score: 5.53553
Sequence: TTTTGAACAAACATTCAAAA
Locus tag: swp_0976
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -2 7 TCTTGAATGAACATTCAAGA swp_0976
25 5 ATTTGAATAATCATTCAAGT
49 5.5 TTTTGAACAAACATTCAAAA
Shewanella putrefaciens CN-32
Position: -119
Score: 7.16778
Sequence: TCTTGAATGTGCATTCAAGA
Position: -92
Score: 5.42819
Sequence: ATTTGAATGAACATTCAAGT
Position: -68
Score: 5.53553
Sequence: TTTTGAATGTTTGTTCAAAA
Locus tag: Sputcn32_2721
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -119 7.2 TCTTGAATGTGCATTCAAGA Sputcn32_2721
-92 5.4 ATTTGAATGAACATTCAAGT
-68 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sediminis HAW-EB3
Position: -128
Score: 7.04337
Sequence: TCTTGAATGTTCATTCAAGA
Position: -101
Score: 5.00085
Sequence: ATTTGAACGATCATTCAAGT
Position: -77
Score: 5.53553
Sequence: TTTTGAACAAACATTCAAAA
Locus tag: Ssed_3643
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -128 7 TCTTGAATGTTCATTCAAGA Ssed_3643
-101 5 ATTTGAACGATCATTCAAGT
-77 5.5 TTTTGAACAAACATTCAAAA
Shewanella sp ANA-3
Position: -114
Score: 7.16778
Sequence: TCTTGAATGTGCATTCAAGA
Position: -87
Score: 5.53924
Sequence: ATTTGAACGATCATTCAAGA
Position: -63
Score: 5.53553
Sequence: TTTTGAATGTTTGTTCAAAA
Locus tag: Shewana3_1158
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -114 7.2 TCTTGAATGTGCATTCAAGA Shewana3_1158
-87 5.5 ATTTGAACGATCATTCAAGA
-63 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp MR-4
Position: -115
Score: 7.16778
Sequence: TCTTGAATGTGCATTCAAGA
Position: -88
Score: 5.53924
Sequence: ATTTGAACGATCATTCAAGA
Position: -64
Score: 5.53553
Sequence: TTTTGAATGTTTGTTCAAAA
Locus tag: Shewmr4_1157
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -115 7.2 TCTTGAATGTGCATTCAAGA Shewmr4_1157
-88 5.5 ATTTGAACGATCATTCAAGA
-64 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp MR-7
Position: -115
Score: 6.95225
Sequence: TCTTGAATATGCATTCAAGA
Position: -88
Score: 5.53924
Sequence: ATTTGAACGATCATTCAAGA
Position: -64
Score: 5.53553
Sequence: TTTTGAATGTTTGTTCAAAA
Locus tag: Shewmr7_1228
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -115 7 TCTTGAATATGCATTCAAGA Shewmr7_1228
-88 5.5 ATTTGAACGATCATTCAAGA
-64 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella sp W3-18-1
Position: -119
Score: 7.16778
Sequence: TCTTGAATGTGCATTCAAGA
Position: -92
Score: 5.42819
Sequence: ATTTGAATGAACATTCAAGT
Position: -68
Score: 5.53553
Sequence: TTTTGAATGTTTGTTCAAAA
Locus tag: Sputw3181_1291
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -119 7.2 TCTTGAATGTGCATTCAAGA Sputw3181_1291
-92 5.4 ATTTGAATGAACATTCAAGT
-68 5.5 TTTTGAATGTTTGTTCAAAA
Shewanella woodyi ATCC 51908
Position: -113
Score: 7.04337
Sequence: TCTTGAATGTTCATTCAAGA
Position: -86
Score: 5.00085
Sequence: ATTTGAACGATCATTCAAGT
Position: -62
Score: 5.53553
Sequence: TTTTGAACAAACATTCAAAA
Locus tag: Swoo_4056
Name: SO3393
Funciton: Transcriptional regulator, TetR family
SO3393 -113 7 TCTTGAATGTTCATTCAAGA Swoo_4056
-86 5 ATTTGAACGATCATTCAAGT
-62 5.5 TTTTGAACAAACATTCAAAA
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