Propagation of CodY regulog to Geobacillus thermodenitrificans NG80-2

Reference regulog properties
Source regulog:	CodY - Bacillales
Regulator type:	Transcription factor
Regulator family:	CodY
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Guanosine triphosphate; Branched-chain amino acids
Phylum:	Firmicutes
Propagated regulon:
Target genome	Geobacillus thermodenitrificans NG80-2
Orthologous TF(s)	GTNG_1068
Regulated genes	39

Built upon 445 sites [see more]

Predicted regulatory interactions in *Geobacillus thermodenitrificans NG80-2*
	Locus tag	Position	Score	Sequence
Position: -84 Score: 4.7 Sequence: AATTTTTTGAAAAAA Locus tag: GTNG_0042
	GTNG_0042	-84	4.7	AATTTTTTGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: spoVG
Ortholog function: Stage V sporulation protein G required for spore cortex synthesis
Bacillus subtilis subsp. subtilis str. 168	BSU00490	-98	4.4	TTTTTTCAAAAAATA
Geobacillus kaustophilus HTA426	GK0042	-96	4.6	AATTTATAAAAAATT
Bacillus cereus ATCC 14579	BC0053	-87	5.1	AATTTTTAAAAAATT

Position: -85 Score: 4.3 Sequence: CTTTTTCAAAAAATT Position: -65 Score: 4.3 Sequence: TCTTTTTTAAAAATT Locus tag: GTNG_0559
	GTNG_0559	-85	4.3	CTTTTTCAAAAAATT
		-65	4.3	TCTTTTTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Bacillus amyloliquefaciens FZB42	RBAM_010260	-75	4.4	AAAAATCAAAAAATT
Anoxybacillus flavithermus WK1	Aflv_2293	-91	4.5	TATTTTTTAAAAAAT
		-90	4.7	ATTTTTTAAAAAATT

Position: -50 Score: 4.7 Sequence: AATTTTTAGACAATA Locus tag: GTNG_0580
	GTNG_0580	-50	4.7	AATTTTTAGACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: azlC
Ortholog function: Branched-chain amino acid permease (azaleucine resistance)
Anoxybacillus flavithermus WK1	Aflv_2051	-29	4.9	AATTTTATGAAAATA
Geobacillus kaustophilus HTA426	GK0673	-51	4.7	AATTTTTAGACAATA

Position: -83 Score: 4.2 Sequence: ATTTTTTTCAAAATA Position: -81 Score: 4.2 Sequence: TTTTTTCAAAATATA Locus tag: GTNG_0585
	GTNG_0585	-83	4.2	ATTTTTTTCAAAATA
		-81	4.2	TTTTTTCAAAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: Competence transcription factor
Bacillus subtilis subsp. subtilis str. 168	BSU10420	-225	4.5	AATTTTTAGACAACT
Bacillus amyloliquefaciens FZB42	RBAM_010600	-88	4.2	TATATTCAAAAAAAA
Bacillus pumilus SAFR-032	BPUM_0978	-222	5	AATTTTTAGACAATT
Bacillus licheniformis DSM 13	BLi01119	-205	5.3	AATTTTTAGAAAATT
Oceanobacillus iheyensis HTE831	OB1177	-94	4.5	TTTATTCTAAAAATT

Position: -340 Score: 4.3 Sequence: ATTTTTTTATAAATT Locus tag: GTNG_0745
	GTNG_0745	-340	4.3	ATTTTTTTATAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metI
Ortholog function: Cystathionine gamma-synthase (EC 2.5.1.48)
Bacillus subtilis subsp. subtilis str. 168	BSU11870	-297	4.6	AATTATTAGAAATTT
		-214	4.3	AACAATCAGAAAATT
Bacillus amyloliquefaciens FZB42	RBAM_011930	-314	4.6	AATTATTAGAAATTT
Bacillus pumilus SAFR-032	BPUM_1119	-297	4.4	AAAATACAGAAAATT
		-287	4.1	AAATTTCAATTAATT
Bacillus licheniformis DSM 13	BLi01289	-164	4	AACAATCAGAATATT
Anoxybacillus flavithermus WK1	Aflv_2067	-228	4.4	ATTTTTCGGAAAATA
		-200	4.6	AAAAATCAGAAAATT
Geobacillus kaustophilus HTA426	GK0866	-341	4.5	AAATTTAAAAAAATT
Bacillus cereus ATCC 14579	BC4253	-344	4.4	AATTTTTTAATAAAT
Paenibacillus sp. JDR-2	Pjdr2_4798	-6	4.4	AACTTTATGAAAATT

Position: -97 Score: 4.2 Sequence: AAATTTCTAAAAAAA Locus tag: GTNG_1225
	GTNG_1225	-97	4.2	AAATTTCTAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutU
Ortholog function: Urocanate hydratase (EC 4.2.1.49)
Bacillus subtilis subsp. subtilis str. 168	BSU39360	-25	4.1	AGTTATCAGAATTTT
Bacillus amyloliquefaciens FZB42	RBAM_036420	-36	4.5	AGTTATCAGAATATT
Geobacillus kaustophilus HTA426	GK1367	-102	4.3	AAAATTCAAAAAAAT
Bacillus cereus ATCC 14579	BC3651	-36	4.8	AATATTCAAATAATT

Position: -223 Score: 4.8 Sequence: AATTATCAGAAATTT Locus tag: GTNG_2184
	GTNG_2184	-223	4.8	AATTATCAGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serA
Ortholog function: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Bacillus subtilis subsp. subtilis str. 168	BSU23070	-44	4.5	AATTATCAGATATTT
Bacillus amyloliquefaciens FZB42	RBAM_021220	-44	4.5	AATTATCAGATATTT
Bacillus pumilus SAFR-032	BPUM_2039	-45	4.5	AATTATCAGATATTT
Bacillus licheniformis DSM 13	BLi02446	-43	4.5	AATTATCAGATATTT
Anoxybacillus flavithermus WK1	Aflv_1055	-47	4.8	AATTATCAGAAATTT
Geobacillus kaustophilus HTA426	GK2247	-86	4.8	AATTATCAGAAATTT

Position: -235 Score: 4.1 Sequence: AATCTTTTGACAAAT Position: -202 Score: 4.3 Sequence: AAAAATCTGATAATT Locus tag: GTNG_2660
	GTNG_2660	-235	4.1	AATCTTTTGACAAAT
		-202	4.3	AAAAATCTGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citZ
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Bacillus subtilis subsp. subtilis str. 168	BSU29140	-224	4.3	AAATGTCTGATTATT
Bacillus amyloliquefaciens FZB42	RBAM_026180	-224	4.2	ATTAATCAGATTATT
Bacillus pumilus SAFR-032	BPUM_2556	-210	4.3	AAATGTCTGATTATT
Bacillus licheniformis DSM 13	BLi03062	-225	4.5	AAATGTCTGATAATT
Anoxybacillus flavithermus WK1	Aflv_0504	-209	4.3	AAAAGTCTGATAATT
Geobacillus kaustophilus HTA426	GK2736	-201	4.3	AAAAGTCTGATAATT
Oceanobacillus iheyensis HTE831	OB2168	-222	4.3	AAATATTAAAAAATT

Position: -103 Score: 4.5 Sequence: AAATTTCAAAAAAAT Position: -78 Score: 4.9 Sequence: AATATTTTAAAAATT Locus tag: GTNG_2711
	GTNG_2711	-103	4.5	AAATTTCAAAAAAAT
		-78	4.9	AATATTTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Bacillus subtilis subsp. subtilis str. 168	BSU29680	-78	4.6	TATATTTTAAAAATT
Bacillus amyloliquefaciens FZB42	RBAM_026800	-73	4.6	TATATTTTAAAAATT
Bacillus pumilus SAFR-032	BPUM_2616	-77	4.6	AGTTTTTTAAAAATT
Bacillus licheniformis DSM 13	BLi03119	-74	4.8	TATTTTTTAAAAATT
Anoxybacillus flavithermus WK1	Aflv_0462	-77	5.1	AATTTTTTAAAAATT
Geobacillus kaustophilus HTA426	GK2806	-102	4.4	AAATTTCAAAAAAGT
		-77	4.9	AATATTTTAAAAATT
Bacillus cereus ATCC 14579	BC4659	-69	4.8	AATATACTGAAAATT

Position: -199 Score: 4.9 Sequence: AATTTTTAAAATATT Position: -174 Score: 4.5 Sequence: ATTTTTTTGAAATTT Locus tag: GTNG_2712
	GTNG_2712	-199	4.9	AATTTTTAAAATATT
		-174	4.5	ATTTTTTTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Bacillus subtilis subsp. subtilis str. 168	BSU29690	-97	4.6	AATTTTTAAAATATA
Bacillus amyloliquefaciens FZB42	RBAM_026810	-100	4.6	AATTTTTAAAATATA
Bacillus pumilus SAFR-032	BPUM_2617	-93	4.6	AATTTTTAAAAAACT
Bacillus licheniformis DSM 13	BLi03120	-96	4.8	AATTTTTAAAAAATA
Anoxybacillus flavithermus WK1	Aflv_0461	-101	5.1	AATTTTTAAAAAATT
Geobacillus kaustophilus HTA426	GK2807	-112	4.9	AATTTTTAAAATATT
		-87	4.4	ACTTTTTTGAAATTT
Bacillus cereus ATCC 14579	BC4660	-110	4.8	AATTTTCAGTATATT
Oceanobacillus iheyensis HTE831	OB2221	-85	4.6	AAATTTCAAAAAATA

Position: -258 Score: 4.4 Sequence: TTTTTACAGAAAATT Locus tag: GTNG_2902
	GTNG_2902	-258	4.4	TTTTTACAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yuiB
Ortholog function: Hypothetical membrane protein
Bacillus subtilis subsp. subtilis str. 168	BSU32080	-36	4.9	TATTATCAGAAAATT
Bacillus amyloliquefaciens FZB42	RBAM_029130	-34	4.9	TATTATCAGAAAATT
Bacillus licheniformis DSM 13	BLi03390	-35	4.9	TATTATCAGAAAATT
Anoxybacillus flavithermus WK1	Aflv_2400	-35	5.2	AATTATCTGAAAATT
Geobacillus kaustophilus HTA426	GK2950	-54	4.4	TTTTTACAGAAAATT
Bacillus halodurans C-125	BH3405	-47	4.3	AAAATTCTGATAATA

Position: -233 Score: 4.4 Sequence: TTTTTTTAGACAATT Locus tag: GTNG_3285
	GTNG_3285	-233	4.4	TTTTTTTAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dppB
Ortholog function: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
Bacillus halodurans C-125	BH0029	-46	4.5	ATTTGTCAAAATATT
Oceanobacillus iheyensis HTE831	OB3068	-112	4.5	TATTTTTACAAAATT

Position: -160 Score: 4.6 Sequence: AATTTACAAAATATT Locus tag: GTNG_3384
	GTNG_3384	-160	4.6	AATTTACAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: putP
Ortholog function: Proline/sodium symporter (TC 2.A.21.2.1)
Bacillus subtilis subsp. subtilis str. 168	BSU03220	-106	4.1	AATAATCAGAATCTT
		-89	4.5	TATTTTGAGAATATT
Bacillus amyloliquefaciens FZB42	RBAM_003460	-23	4.8	TATTTTTAGAATATT
Bacillus licheniformis DSM 13	BLi00375	-85	4.5	ATTAGTCTAAAAATT
Geobacillus kaustophilus HTA426	GK3452	-158	4.8	AATTTACAGAATATT
Bacillus cereus ATCC 14579	BC1231	-106	4.6	ACATTTCTGAAAATT
		-76	4.6	ATTTTTCAGAATAAT

Position: -264 Score: 4.6 Sequence: AATATTTTGTAAATT Locus tag: GTNG_3385
	GTNG_3385	-264	4.6	AATATTTTGTAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnH
Ortholog function: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Anoxybacillus flavithermus WK1	Aflv_2792	-122	4.7	TATTTTTATAAAATT
Geobacillus kaustophilus HTA426	GK3453	-264	4.8	AATATTCTGTAAATT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CodY regulog to Geobacillus thermodenitrificans NG80-2

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --