Propagation of NorR regulog to Shewanella sediminis HAW-EB3

Reference regulog properties
Source regulog:	NorR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrosative stress response
Effector:	Nitric oxide
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Shewanella sediminis HAW-EB3
Orthologous TF(s)	Ssed_3823
Regulated genes	3

Built upon 91 sites [see more]

Predicted regulatory interactions in *Shewanella sediminis HAW-EB3*
	Locus tag	Position	Score	Sequence
Position: -171 Score: 4.9 Sequence: AAGTGTAAAAATGACACTG Locus tag: Ssed_3822
	Ssed_3822	-171	4.9	AAGTGTAAAAATGACACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: norB
Ortholog function: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
Shewanella putrefaciens CN-32	Sputcn32_3072	-190	3.9	GATTGTTTTAAAGACACAA
		-162	4.9	TAGTGTCATAAAAACAATA
		-144	5.7	AATTGTCATTATGACACTT
		-120	4.1	ACGTATCAAAAAGACACTC
Shewanella sp W3-18-1	Sputw3181_0873	-190	3.9	GATTGTTTTAAAGACACAA
		-162	4.9	TAGTGTCATAAAAACAATA
		-144	5.7	AATTGTCATTATGACACTT
		-120	4.1	ACGTATCAAAAAGACACTC
Shewanella sp ANA-3	Shewana3_0846	-203	3.6	CATTGTGTTATCGACATAC
		-174	4.9	AGCTGTCATAAAGACAATC
		-156	4.5	CACTGTCATATCAACAATC
		-131	4.6	CAGTATCAAAAAGACAATC
Shewanella sp MR-4	Shewmr4_3089	-203	4	CATTGTGTTATCGACATTC
		-174	4.5	AGCTGTCACAAAGACAATA
		-156	5.4	AACTGTCATATCGACAATA
		-131	4.6	CAGTATCAAAAAGACAATT
		-33	3.6	ACGTATCAAAATGACGTTG
Shewanella sp MR-7	Shewmr7_0883	-203	4	CATTGTGTTATCGACATTC
		-174	5	AGCTGTCATAAAGACAATA
		-156	5	AGCTGTCATATCGACAACA
		-131	4.7	CAGTATCAAAAAGACAATA
Shewanella frigidimarina NCIMB 400	Sfri_3253	-181	4.7	CGCTGTCATTTCGACATTA
		-162	4.7	AATAGTCTTATTGACACAT
		-138	4.7	ATGTGTCAATAAGACTATT
Shewanella amazonensis SB2B	Sama_0728	-169	4.8	TAGTGTCATTTATACAATT
		-149	4.5	AAATGTCTTTATGACATCA
Shewanella loihica PV-4	Shew_0657	-204	4.2	AAGTATCAAATCGACACAG
		-175	4.5	CACTGTCTTTTTGACACGC
		-157	4.6	CGGTGTCATTTTTACACTT
		-132	5.9	GATTGTCATTATGACAATT
Shewanella halifaxensis HAW-EB4	Shal_3554	-186	4.5	AGATGTCAATTCGACAAAG
		-165	4.1	CGTTATCAAATAGACAGCT
		-142	5.3	CACAGTCAAAATGACAACA
Shewanella piezotolerans WP3	swp_0833	-173	5.2	CATTGTCAAAAAGACACTT
		-155	4.8	TAGTGTCATATGGACACAC
		-131	5.1	CATTGTCTTTATGACAACC
Shewanella sediminis HAW-EB3	Ssed_3822	-171	4.9	AAGTGTAAAAATGACACTG
		-153	4.3	GGCTGTTATTAAGACACTA
		-129	4.5	GGGTGTCCTAATGACACAA
Shewanella woodyi ATCC 51908	Swoo_0761	-199	4	ATCAGTCATATTGATATTC
		-172	4.9	AGCTGTCATTTAGACACTA
		-154	5.1	AACTGTCATTTTTACAATA
		-130	5	CATAGTCATAATGACACAT

Position: -136 Score: 5.2 Sequence: AAATGTCAATATGACAAGC Locus tag: Ssed_3823
	Ssed_3823	-136	5.2	AAATGTCAATATGACAAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: norR
Ortholog function: anaerobic nitric oxide reductase transcription regulator, Fis family
Shewanella putrefaciens CN-32	Sputcn32_3073	-50	4.6	CTGTGTCAATATCACAATT
Shewanella sp W3-18-1	Sputw3181_0872	-50	4.6	CTGTGTCAATATCACAATT
Shewanella sp ANA-3	Shewana3_0845	-166	3.7	AGGTGTCGTTTAGGCACCT
		-58	4.6	CTGTGTCAATATAACAATC
Shewanella sp MR-4	Shewmr4_3090	-167	3.7	AGGTGTCGTTTAGGCACCT
		-58	4.6	CTGTGTCAATATAACAATC
Shewanella sp MR-7	Shewmr7_0882	-166	3.7	AGGTGTCGTTTAGGCACCT
		-58	4.6	CTGTGTCAATATAACAATC
Shewanella frigidimarina NCIMB 400	Sfri_3254	-58	4.4	TGTTGTTATATTCACACTT
		-43	5	ACTTGTCATAATGACATCA
Shewanella amazonensis SB2B	Sama_0727	-76	5	CCATGTCAAAATGACAATT
Shewanella loihica PV-4	Shew_0656	-120	5.3	AAGTGTAAAAATGACAATA
		-96	4.4	TACTGTTAAATTGACATAT
Shewanella pealeana ATCC 700345	Spea_3444	-154	4.7	AAGTGTAAAATTGACATTG
		-119	4.1	TACTGTTAAAAAGACACAC
Shewanella halifaxensis HAW-EB4	Shal_3555	-86	4.3	TACTGTAAAAAAGACAGCA
Shewanella piezotolerans WP3	swp_0832	-105	4.2	AACAGTATATTTGACACTG
		-72	4.9	TAATGTCAAAAAGACAAAA
Shewanella sediminis HAW-EB3	Ssed_3823	-160	4.1	TTTTGTATTTATGACAGCA
		-136	5.2	AAATGTCAATATGACAAGC
Shewanella woodyi ATCC 51908	Swoo_0760	-62	5.2	GATTGTCAAAATGACATAC
		-37	4.1	TATGGTCATATTCAAACCA

Position: -176 Score: 4.6 Sequence: TAGTGTTGATATGACACTG Locus tag: Ssed_4053
	Ssed_4053	-176	4.6	TAGTGTTGATATGACACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: norV
Ortholog function: Anaerobic nitric oxide reductase flavorubredoxin
Shewanella piezotolerans WP3	swp_1079	-207	4	CTTTGTCATAAAGACTCGG
		-182	4.2	GGGTGTCTTAATGACATAG
		-162	4.5	GAGTGTCTTTATGATACTT
		-138	5.1	TGTTGTCATTATTACAATT
Shewanella sediminis HAW-EB3	Ssed_4053	-213	4.1	TCCTGTTATTAAGACACTC
		-176	4.6	TAGTGTTGATATGACACTG
		-157	4.1	CAATGTCTTTTGGACAGTT
		-133	4	GCATGTCTTTATGACATCT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NorR regulog to Shewanella sediminis HAW-EB3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --