Propagation of TreR regulog to Shewanella baltica OS223
| Source regulog: | TreR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella baltica OS223 |
| Orthologous TF(s) | Sbal223_2960 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -74
Score: 6.5 Sequence: TAATGCAATCGATTGCAAAA
Locus tag: Sbal223_2962
|
||||
| Sbal223_2962 | -74 | 6.5 | TAATGCAATCGATTGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: Trehalose phosphorylase (EC 2.4.1.64) | ||||
| Shewanella woodyi ATCC 51908 | Swoo_1437 | -73 | 6.4 | TTTTGCAATCGTTTGCAAAA |
|
Position: -75
Score: 6.5 Sequence: TTTTGCAATCGATTGCATTA
Locus tag: Sbal223_2963
|
||||
| Sbal223_2963 | -75 | 6.5 | TTTTGCAATCGATTGCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treT | ||||
| Ortholog function: Predicted trehalose permease, MFS family, FucP subfamily | ||||
| Shewanella frigidimarina NCIMB 400 | Sfri_3505 | -72 | 6.5 | AAATGCAAACGATTGCATTA |
| Shewanella woodyi ATCC 51908 | Swoo_1438 | -175 | 6.4 | TTTTGCAAACGATTGCAAAA |