Propagation of NhaR regulog to Shewanella sp ANA-3
| Source regulog: | NhaR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | Osmotic stress response |
| Effector: | Potassium ion |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella sp ANA-3 |
| Orthologous TF(s) | Shewana3_3036 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -88
Score: 5.6 Sequence: CCTCGATAACGTCGAGG
Locus tag: Shewana3_2111
|
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| Shewana3_2111 | -88 | 5.6 | CCTCGATAACGTCGAGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ccoH | ||||
| Ortholog function: Cbb3-type cytochrome oxidase assembly protein | ||||
| Shewanella oneidensis MR-1 | SO_2360 | -88 | 5.6 | CCTCGATAACCTCGAGG |
| Shewanella putrefaciens CN-32 | Sputcn32_1955 | -86 | 5.5 | CCTCGAGAGTATCGAGG |
| Shewanella sp W3-18-1 | Sputw3181_2050 | -86 | 5.5 | CCTCGAGAGTATCGAGG |
| Shewanella sp ANA-3 | Shewana3_2111 | -88 | 5.6 | CCTCGATAACGTCGAGG |
| Shewanella sp MR-4 | Shewmr4_2010 | -88 | 5.6 | CCTCGATAACGTCGAGG |
| Shewanella sp MR-7 | Shewmr7_1965 | -88 | 5.6 | CCTCGATAACGTCGAGG |
| Shewanella baltica OS155 | Sbal_2205 | -88 | 5.4 | CCTCGAAGACTTCGAGG |
| Shewanella frigidimarina NCIMB 400 | Sfri_2014 | -94 | 5.9 | CCTCGAGATTATCGAGG |
| Shewanella pealeana ATCC 700345 | Spea_2218 | -115 | 5.3 | CCTCGTTAACAACGAGG |
| Shewanella halifaxensis HAW-EB4 | Shal_2201 | -114 | 5.3 | CCTCGTCATTAACGAGG |
| Shewanella piezotolerans WP3 | swp_2576 | -103 | 4.9 | CCTCGTCACTTACGAGG |
| Shewanella sediminis HAW-EB3 | Ssed_2215 | -88 | 5.6 | CCTCGATCTTATCGAGG |
| Shewanella woodyi ATCC 51908 | Swoo_2421 | -88 | 5.2 | CCTCGATCGTATCGAGG |
|
Position: -97
Score: 6 Sequence: CCTCGGAATTATCGAGG
Locus tag: Shewana3_3038
|
||||
| Shewana3_3038 | -97 | 6 | CCTCGGAATTATCGAGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nhaA | ||||
| Ortholog function: Na+/H+ antiporter NhaA | ||||
| Shewanella oneidensis MR-1 | SO_1336 | -97 | 5.6 | CCTCGGAATAGCCGAGG |
| Shewanella putrefaciens CN-32 | Sputcn32_1147 | -96 | 5.6 | CCTCGGAATAGCCGAGG |
| Shewanella sp W3-18-1 | Sputw3181_3017 | -96 | 5.6 | CCTCGGAATAGCCGAGG |
| Shewanella sp ANA-3 | Shewana3_3038 | -97 | 6 | CCTCGGAATTATCGAGG |
| Shewanella sp MR-4 | Shewmr4_2860 | -96 | 5.7 | CCTCGGAATTAACGAGG |
| Shewanella sp MR-7 | Shewmr7_2942 | -96 | 5.7 | CCTCGGAATTAACGAGG |
| Shewanella baltica OS155 | Sbal_1189 | -96 | 5.8 | CCTCGGAATAACCGAGG |
| Shewanella denitrificans OS217 | Sden_2778 | -93 | 4.4 | TATCGGTATTATCGATA |
| Shewanella frigidimarina NCIMB 400 | Sfri_2941 | -94 | 5 | CCTCGGTTAAACCGAGT |
| Shewanella amazonensis SB2B | Sama_0868 | -98 | 5.9 | CCTCGGAAATTTCGAGG |
| Shewanella loihica PV-4 | Shew_1042 | -97 | 5.6 | CCTCGGAATTACCGATG |
| Shewanella pealeana ATCC 700345 | Spea_1025 | -292 | 4.7 | GCTCGTTATTTTCGATG |
| -97 | 4.6 | CTTCGGATATTCCGACG | ||
| Shewanella halifaxensis HAW-EB4 | Shal_1071 | -292 | 4.7 | CTTCGATTTTTTCGAGT |
| -97 | 4.6 | CTTCGGATATCCCGATG | ||
| Shewanella piezotolerans WP3 | swp_3792 | -174 | 5.3 | CCTCGGATATTCCGATG |
| Shewanella sediminis HAW-EB3 | Ssed_1136 | -96 | 5.5 | CCTCGGGAATACCGATG |
|
Position: -30
Score: 5.5 Sequence: CCTCGGTACTGCCGAGG
Locus tag: Shewana3_3690
|
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| Shewana3_3690 | -30 | 5.5 | CCTCGGTACTGCCGAGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: otr | ||||
| Ortholog function: Octaheme tetrathionate reductase | ||||
| Shewanella sp ANA-3 | Shewana3_3690 | -30 | 5.5 | CCTCGGTACTGCCGAGG |
| Shewanella sp MR-4 | Shewmr4_3513 | -30 | 5.9 | CCTCGGTATTGCCGAGG |
| Shewanella sp MR-7 | Shewmr7_0439 | -30 | 5.6 | CCTCGGTATCGCCGAGG |