Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ccoH gene

Properties
Regulog: NhaR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Osmotic stress response
Effector: Potassium ion
Phylum: Proteobacteria/gamma
Built upon 33 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -88
Score: 5.44471
Sequence: CCTCGAAGACTTCGAGG
Locus tag: Sbal_2205
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sbal_2206
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Sbal_2207
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sbal_2208
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Sbal_2209
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.4 CCTCGAAGACTTCGAGG Sbal_2205
Shewanella frigidimarina NCIMB 400
Position: -94
Score: 5.85088
Sequence: CCTCGAGATTATCGAGG
Locus tag: Sfri_2014
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sfri_2015
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Sfri_2016
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sfri_2017
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Sfri_2018
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -94 5.9 CCTCGAGATTATCGAGG Sfri_2014
Shewanella halifaxensis HAW-EB4
Position: -114
Score: 5.34183
Sequence: CCTCGTCATTAACGAGG
Locus tag: Shal_2201
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shal_2202
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Shal_2203
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shal_2204
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Shal_2205
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -114 5.3 CCTCGTCATTAACGAGG Shal_2201
Shewanella oneidensis MR-1
Position: -88
Score: 5.59951
Sequence: CCTCGATAACCTCGAGG
Locus tag: SO_2360
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: SO_2359
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: SO_2358
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: SO_2357
Name: SO2357
Funciton: Integral membrane protein
Locus tag: SO_2356
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.6 CCTCGATAACCTCGAGG SO_2360
Shewanella pealeana ATCC 700345
Position: -115
Score: 5.29804
Sequence: CCTCGTTAACAACGAGG
Locus tag: Spea_2218
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Spea_2219
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Spea_2220
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Spea_2221
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Spea_2222
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -115 5.3 CCTCGTTAACAACGAGG Spea_2218
Shewanella piezotolerans WP3
Position: -103
Score: 4.91157
Sequence: CCTCGTCACTTACGAGG
Locus tag: swp_2576
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: swp_2577
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: swp_2578
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: swp_2579
Name: SO2357
Funciton: Integral membrane protein
Locus tag: swp_2580
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -103 4.9 CCTCGTCACTTACGAGG swp_2576
Shewanella putrefaciens CN-32
Position: -86
Score: 5.49008
Sequence: CCTCGAGAGTATCGAGG
Locus tag: Sputcn32_1955
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sputcn32_1954
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Sputcn32_1953
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sputcn32_1952
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Sputcn32_1951
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -86 5.5 CCTCGAGAGTATCGAGG Sputcn32_1955
Shewanella sediminis HAW-EB3
Position: -88
Score: 5.58451
Sequence: CCTCGATCTTATCGAGG
Locus tag: Ssed_2215
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Ssed_2216
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Ssed_2217
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Ssed_2218
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Ssed_2219
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.6 CCTCGATCTTATCGAGG Ssed_2215
Shewanella sp ANA-3
Position: -88
Score: 5.62742
Sequence: CCTCGATAACGTCGAGG
Locus tag: Shewana3_2111
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewana3_2112
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Shewana3_2113
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewana3_2114
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Shewana3_2115
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.6 CCTCGATAACGTCGAGG Shewana3_2111
Shewanella sp MR-4
Position: -88
Score: 5.62742
Sequence: CCTCGATAACGTCGAGG
Locus tag: Shewmr4_2010
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr4_2011
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Shewmr4_2012
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr4_2013
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Shewmr4_2014
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.6 CCTCGATAACGTCGAGG Shewmr4_2010
Shewanella sp MR-7
Position: -88
Score: 5.62742
Sequence: CCTCGATAACGTCGAGG
Locus tag: Shewmr7_1965
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr7_1964
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Shewmr7_1963
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr7_1962
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Shewmr7_1961
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.6 CCTCGATAACGTCGAGG Shewmr7_1965
Shewanella sp W3-18-1
Position: -86
Score: 5.49008
Sequence: CCTCGAGAGTATCGAGG
Locus tag: Sputw3181_2050
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sputw3181_2051
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Sputw3181_2052
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Sputw3181_2053
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Sputw3181_2054
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -86 5.5 CCTCGAGAGTATCGAGG Sputw3181_2050
Shewanella woodyi ATCC 51908
Position: -88
Score: 5.22371
Sequence: CCTCGATCGTATCGAGG
Locus tag: Swoo_2421
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Swoo_2420
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Swoo_2419
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Swoo_2418
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Swoo_2417
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH-ccoI-ccoS-SO2357-fnr -88 5.2 CCTCGATCGTATCGAGG Swoo_2421
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