Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RocR regulog to Geobacillus sp. Y412MC61

Reference regulog properties
Source regulog: RocR - Bacillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Arginine degradation; Ornithine degradation
Effector: Ornithine; L-citrulline
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC61
Orthologous TF(s) GYMC61_1041
Regulated genes 3
Built upon 26 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC61
Locus tag Position Score Sequence
Position: -160
Score: 8.1
Sequence: TGCAAAAT-(1)-ATTTTTCA
Locus tag: GYMC61_1041
GYMC61_1041 -160 8.1 TGCAAAAT-(1)-ATTTTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocR
Ortholog function: Transcriptional activator of arginine utilization, Fis family
Geobacillus kaustophilus HTA426 GK0185 -159 8.1 TGCAAAAT-(1)-ATTTTTCA
-84 7.7 AGCAAAAA-(1)-TTTTTTCA
Position: -93
Score: 8.1
Sequence: TGAAAAAT-(1)-ATTTTGCA
Locus tag: GYMC61_1042
GYMC61_1042 -93 8.1 TGAAAAAT-(1)-ATTTTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocC
Ortholog function: Arginine/ornithine permease
Geobacillus kaustophilus HTA426 GK0186 -168 7.7 TGAAAAAA-(1)-TTTTTGCT
-93 8.1 TGAAAAAT-(1)-ATTTTGCA
-37 7.7 CGAAAAAT-(1)-TTTTTGCC