Propagation of CodY regulog to Bacillus amyloliquefaciens FZB42
| Source regulog: | CodY - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus amyloliquefaciens FZB42 |
| Orthologous TF(s) | RBAM_016000 |
| Regulated genes | 89 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -268
Score: 4.4 Sequence: TATTATCTTAATATT
Locus tag: RBAM_002460
|
||||
| RBAM_002460 | -268 | 4.4 | TATTATCTTAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybxG | ||||
| Ortholog function: Amino acid permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02060 | -257 | 4.8 | AATATTCAAATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_002460 | -268 | 4.4 | TATTATCTTAATATT |
| Bacillus licheniformis DSM 13 | BLi00220 | -241 | 4.4 | TATTATAAGAATATT |
|
Position: -55
Score: 4.5 Sequence: TATTTTCTGACAAGT
Locus tag: RBAM_002680
|
||||
| RBAM_002680 | -55 | 4.5 | TATTTTCTGACAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gldA | ||||
| Ortholog function: Glycerol dehydrogenase (EC 1.1.1.6) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002680 | -55 | 4.5 | TATTTTCTGACAAGT |
| Oceanobacillus iheyensis HTE831 | OB3328 | -264 | 4.4 | AATAGTATGATAATT |
|
Position: -229
Score: 4.4 Sequence: AATTATCAAAATTTT
Locus tag: RBAM_002750
|
||||
| RBAM_002750 | -229 | 4.4 | AATTATCAAAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltP | ||||
| Ortholog function: Proton/glutamate symport protein @ Proton/aspartate symport protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002750 | -229 | 4.4 | AATTATCAAAATTTT |
| Bacillus pumilus SAFR-032 | BPUM_0501 | -44 | 4.5 | AAAATTCTTAAAATT |
|
Position: -152
Score: 4.4 Sequence: AAAATTTTGATAATT
Locus tag: RBAM_002760
|
||||
| RBAM_002760 | -152 | 4.4 | AAAATTTTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybgE | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02390 | -118 | 4.9 | AATATTCTGAAATTT |
| -38 | 4.6 | AATATTTAAACAATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_002760 | -152 | 4.4 | AAAATTTTGATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_035750 | -48 | 4.3 | TATTTTCAAATAAGT |
| Bacillus pumilus SAFR-032 | BPUM_3500 | -226 | 4.4 | AATTGTCAGATTAAT |
|
Position: -104
Score: 4.6 Sequence: ACTATTCAGAAAATA
Locus tag: RBAM_003250
|
||||
| RBAM_003250 | -104 | 4.6 | ACTATTCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amhX | ||||
| Ortholog function: Amidohydrolase amhX (EC 3.5.1.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03010 | -116 | 4.3 | ATTATTCTGAATAGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_003250 | -104 | 4.6 | ACTATTCAGAAAATA |
| Bacillus pumilus SAFR-032 | BPUM_0275 | -116 | 5 | AATTTTCAGAATAAT |
|
Position: -182
Score: 4.6 Sequence: TATTTTCTGAATAGT
Locus tag: RBAM_003260
|
||||
| RBAM_003260 | -182 | 4.6 | TATTTTCTGAATAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycgA | ||||
| Ortholog function: Putative integral inner membrane protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_003260 | -182 | 4.6 | TATTTTCTGAATAGT |
| Bacillus pumilus SAFR-032 | BPUM_0276 | -52 | 5 | ATTATTCTGAAAATT |
|
Position: -23
Score: 4.8 Sequence: TATTTTTAGAATATT
Locus tag: RBAM_003440
|
||||
| RBAM_003440 | -23 | 4.8 | TATTTTTAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putB | ||||
| Ortholog function: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03200 | -106 | 4.1 | AATAATCAGAATCTT |
| -89 | 4.5 | TATTTTGAGAATATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_003440 | -23 | 4.8 | TATTTTTAGAATATT |
| Bacillus licheniformis DSM 13 | BLi00373 | -155 | 4.3 | AAGTTTCTGAAAAAA |
|
Position: -109
Score: 4.4 Sequence: AATTTTTAGATTTTT
Locus tag: RBAM_003510
|
||||
| RBAM_003510 | -109 | 4.4 | AATTTTTAGATTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nasD | ||||
| Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03300 | -121 | 4.8 | ATTTTTCATAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_003510 | -109 | 4.4 | AATTTTTAGATTTTT |
|
Position: -185
Score: 4.5 Sequence: TATTTTTAAATAATT
Locus tag: RBAM_005540
|
||||
| RBAM_005540 | -185 | 4.5 | TATTTTTAAATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cotR | ||||
| Ortholog function: Putative sporulation hydrolase (EC=3.1.1.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU34530 | -218 | 4.7 | ATTTTTCAAACAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_005540 | -185 | 4.5 | TATTTTTAAATAATT |
|
Position: -160
Score: 4.3 Sequence: AAATAACAGAAAATT
Locus tag: RBAM_006710
|
||||
| RBAM_006710 | -160 | 4.3 | AAATAACAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabP | ||||
| Ortholog function: Gamma-aminobutyrate (GABA) permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06310 | -48 | 4.7 | AATTATCATAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_006710 | -160 | 4.3 | AAATAACAGAAAATT |
| -45 | 4 | ACTTGTCGGAATATT | ||
| Bacillus pumilus SAFR-032 | BPUM_0543 | -231 | 4.5 | AAATTTCAGAATAAT |
| -33 | 4.3 | AATATTCTAAAAACA | ||
|
Position: -273
Score: 4.5 Sequence: ATATGTCAGAAAATT
Locus tag: RBAM_007060
|
||||
| RBAM_007060 | -273 | 4.5 | ATATGTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuE | ||||
| Ortholog function: Sodium/proline symporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06660 | -256 | 5 | ATTTTTCTGAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_007060 | -273 | 4.5 | ATATGTCAGAAAATT |
| Bacillus pumilus SAFR-032 | BPUM_0643 | -231 | 4.9 | ATTTATCAGAAAATT |
| Bacillus licheniformis DSM 13 | BLi00728 | -289 | 5.1 | AATATTCAGAATATT |
| Bacillus cereus ATCC 14579 | BC3644 | -214 | 5.3 | AATTTTCTGAATATT |
|
Position: -163
Score: 4.5 Sequence: AATTTTCTGACATAT
Locus tag: RBAM_007070
|
||||
| RBAM_007070 | -163 | 4.5 | AATTTTCTGACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gatC | ||||
| Ortholog function: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06670 | -172 | 5 | AATATTCAGAAAAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_007070 | -163 | 4.5 | AATTTTCTGACATAT |
| Bacillus pumilus SAFR-032 | BPUM_0644 | -182 | 4.9 | AATTTTCTGATAAAT |
| Bacillus licheniformis DSM 13 | BLi00730 | -167 | 5.1 | AATATTCTGAATATT |
|
Position: -67
Score: 4.6 Sequence: AATATTTAAAAAATA
Locus tag: RBAM_009690
|
||||
| RBAM_009690 | -67 | 4.6 | AATATTTAAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citR | ||||
| Ortholog function: Transcriptional regulator of citrate synthase, LysR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU09430 | -68 | 4.6 | AATATTTAAAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_009690 | -67 | 4.6 | AATATTTAAAAAATA |
| Bacillus licheniformis DSM 13 | BLi01009 | -65 | 4.6 | AATATTTAAAAAATA |
|
Position: -51
Score: 4.6 Sequence: TATTTTTTAAATATT
Locus tag: RBAM_009700
|
||||
| RBAM_009700 | -51 | 4.6 | TATTTTTTAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citA | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU09440 | -55 | 4.6 | TATTTTTTAAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_009700 | -51 | 4.6 | TATTTTTTAAATATT |
| Bacillus licheniformis DSM 13 | BLi01010 | -60 | 4.6 | TATTTTTTAAATATT |
|
Position: -165
Score: 4.8 Sequence: AATTTTCAAAAAAGT
Locus tag: RBAM_009720
|
||||
| RBAM_009720 | -165 | 4.8 | AATTTTCAAAAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhdG | ||||
| Ortholog function: Amino acid permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU09460 | -181 | 4.7 | ATTTTTCTAACAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_009720 | -165 | 4.8 | AATTTTCAAAAAAGT |
|
Position: -75
Score: 4.4 Sequence: AAAAATCAAAAAATT
Locus tag: RBAM_010260
|
||||
| RBAM_010260 | -75 | 4.4 | AAAAATCAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_010260 | -75 | 4.4 | AAAAATCAAAAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_2293 | -91 | 4.5 | TATTTTTTAAAAAAT |
| -90 | 4.7 | ATTTTTTAAAAAATT | ||
|
Position: -57
Score: 4.2 Sequence: AATCTTCTGACATTT
Locus tag: RBAM_010310
|
||||
| RBAM_010310 | -57 | 4.2 | AATCTTCTGACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhaA | ||||
| Ortholog function: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10070 | -57 | 4.4 | AATATTCAGACTTTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_010310 | -57 | 4.2 | AATCTTCTGACATTT |
| Bacillus pumilus SAFR-032 | BPUM_0954 | -58 | 4.2 | AAGATTCTAACAATT |
| Bacillus licheniformis DSM 13 | BLi01088 | -50 | 4.9 | AATTGTCATAAAATT |
| Oceanobacillus iheyensis HTE831 | OB1157 | -58 | 4.3 | AATTATATGAATAAT |
|
Position: -88
Score: 4.2 Sequence: TATATTCAAAAAAAA
Locus tag: RBAM_010600
|
||||
| RBAM_010600 | -88 | 4.2 | TATATTCAAAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: comK | ||||
| Ortholog function: Competence transcription factor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10420 | -225 | 4.5 | AATTTTTAGACAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_010600 | -88 | 4.2 | TATATTCAAAAAAAA |
| Bacillus pumilus SAFR-032 | BPUM_0978 | -222 | 5 | AATTTTTAGACAATT |
| Bacillus licheniformis DSM 13 | BLi01119 | -205 | 5.3 | AATTTTTAGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB1177 | -94 | 4.5 | TTTATTCTAAAAATT |
|
Position: -85
Score: 4.6 Sequence: AAATTTCAGACTATT
Locus tag: RBAM_010680
|
||||
| RBAM_010680 | -85 | 4.6 | AAATTTCAGACTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjC | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10460 | -159 | 4.5 | TAATTTCAGACAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_010680 | -85 | 4.6 | AAATTTCAGACTATT |
|
Position: -115
Score: 4.3 Sequence: AATAATCAGAAAAGA
Locus tag: RBAM_011430
|
||||
| RBAM_011430 | -115 | 4.3 | AATAATCAGAAAAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA | ||||
| Ortholog function: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11430 | -116 | 4.3 | AATAATCAGAAAAGA |
| Bacillus amyloliquefaciens FZB42 | RBAM_011430 | -115 | 4.3 | AATAATCAGAAAAGA |
|
Position: -70
Score: 4.6 Sequence: AAATTTCTAATAATT
Locus tag: RBAM_011920
|
||||
| RBAM_011920 | -70 | 4.6 | AAATTTCTAATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycjH | ||||
| Ortholog function: Putative acetyl esterase YjcH (EC 3.1.1.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11860 | -73 | 4.6 | AAATTTCTAATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_011920 | -70 | 4.6 | AAATTTCTAATAATT |
| Bacillus pumilus SAFR-032 | BPUM_1118 | -140 | 4.4 | AATTTTCTGTATTTT |
| Geobacillus kaustophilus HTA426 | GK0865 | -172 | 4.5 | AATTTTTTTAAATTT |
|
Position: -314
Score: 4.6 Sequence: AATTATTAGAAATTT
Position: -220
Score: 4 Sequence: AACAATCAGAAAATA
Locus tag: RBAM_011930
|
||||
| RBAM_011930 | -314 | 4.6 | AATTATTAGAAATTT | |
| -220 | 4 | AACAATCAGAAAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metI | ||||
| Ortholog function: Cystathionine gamma-synthase (EC 2.5.1.48) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11870 | -297 | 4.6 | AATTATTAGAAATTT |
| -214 | 4.3 | AACAATCAGAAAATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_011930 | -314 | 4.6 | AATTATTAGAAATTT |
| Bacillus pumilus SAFR-032 | BPUM_1119 | -297 | 4.4 | AAAATACAGAAAATT |
| -287 | 4.1 | AAATTTCAATTAATT | ||
| Bacillus licheniformis DSM 13 | BLi01289 | -164 | 4 | AACAATCAGAATATT |
| Anoxybacillus flavithermus WK1 | Aflv_2067 | -228 | 4.4 | ATTTTTCGGAAAATA |
| -200 | 4.6 | AAAAATCAGAAAATT | ||
| Geobacillus kaustophilus HTA426 | GK0866 | -341 | 4.5 | AAATTTAAAAAAATT |
| Bacillus cereus ATCC 14579 | BC4253 | -344 | 4.4 | AATTTTTTAATAAAT |
| Paenibacillus sp. JDR-2 | Pjdr2_4798 | -6 | 4.4 | AACTTTATGAAAATT |
|
Position: -84
Score: 5 Sequence: AATTTTCCGAAAATT
Locus tag: RBAM_012430
|
||||
| RBAM_012430 | -84 | 5 | AATTTTCCGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjnA | ||||
| Ortholog function: Putative integral membrane protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU12400 | -84 | 4.7 | AAAATTCAAAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_012430 | -84 | 5 | AATTTTCCGAAAATT |
|
Position: -58
Score: 4.5 Sequence: ATTTGTTAGAATATT
Locus tag: RBAM_012770
|
||||
| RBAM_012770 | -58 | 4.5 | ATTTGTTAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dppA | ||||
| Ortholog function: D-aminopeptidase (EC 3.4.11.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU12920 | -43 | 4.5 | ATTTGTTAGAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_012770 | -58 | 4.5 | ATTTGTTAGAATATT |
| Bacillus pumilus SAFR-032 | BPUM_1184 | -55 | 5 | ATTTTTTAGAAAATT |
| Bacillus licheniformis DSM 13 | BLi01392 | -61 | 4.5 | ATTTGTTAGAATATT |
| Oceanobacillus iheyensis HTE831 | OB2971 | -96 | 4.5 | AATATTCAGATTAAT |
| -41 | 4.5 | AATTAATAGAAAATT | ||
|
Position: -90
Score: 4.6 Sequence: AATTTTCTGAAATGT
Locus tag: RBAM_013310
|
||||
| RBAM_013310 | -90 | 4.6 | AATTTTCTGAAATGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kinE | ||||
| Ortholog function: Sporulation kinase E | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU13530 | -90 | 5.1 | AATTTTCTGAAATTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_013310 | -90 | 4.6 | AATTTTCTGAAATGT |
| Anoxybacillus flavithermus WK1 | Aflv_2006 | -83 | 4.8 | AATTTTCGGAATATT |
|
Position: -133
Score: 4.6 Sequence: CATTTTCAGAAAATA
Locus tag: RBAM_014000
|
||||
| RBAM_014000 | -133 | 4.6 | CATTTTCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rok | ||||
| Ortholog function: ComK repressor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU14240 | -134 | 4.6 | CATTTTCAGAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_014000 | -133 | 4.6 | CATTTTCAGAAAATA |
|
Position: -115
Score: 4.4 Sequence: AATTATATAACAATT
Locus tag: RBAM_014460
|
||||
| RBAM_014460 | -115 | 4.4 | AATTATATAACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: slp | ||||
| Ortholog function: Peptidoglycan-associated protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU14620 | -95 | 4.4 | AATTATATAACAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_014460 | -115 | 4.4 | AATTATATAACAATT |
|
Position: -42
Score: 4.8 Sequence: AGTTTTTAGAAAATT
Locus tag: RBAM_015170
|
||||
| RBAM_015170 | -42 | 4.8 | AGTTTTTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ylmA | ||||
| Ortholog function: Putative ABC transporter, ATP-binding protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU15340 | -52 | 4.7 | AGTTTTATGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_015170 | -42 | 4.8 | AGTTTTTAGAAAATT |
| Bacillus licheniformis DSM 13 | BLi01752 | -39 | 4.7 | ATTTATCAGAATATT |
|
Position: -186
Score: 4.4 Sequence: TATTTTATAAAAATA
Locus tag: RBAM_016820
|
||||
| RBAM_016820 | -186 | 4.4 | TATTTTATAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spoVS | ||||
| Ortholog function: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU16980 | -186 | 4.4 | TATTTTATAAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_016820 | -186 | 4.4 | TATTTTATAAAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_1527 | -116 | 4.6 | ATTTTTCTGAAAAAA |
| Bacillus cereus ATCC 14579 | BC3776 | -113 | 4.6 | ATTTTTTAGAAAAAT |
|
Position: -137
Score: 4.5 Sequence: AATATTCAAAAAAAA
Locus tag: RBAM_016830
|
||||
| RBAM_016830 | -137 | 4.5 | AATATTCAAAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tdh | ||||
| Ortholog function: L-threonine 3-dehydrogenase (EC 1.1.1.103) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_016830 | -137 | 4.5 | AATATTCAAAAAAAA |
| Bacillus pumilus SAFR-032 | BPUM_1603 | -136 | 4.4 | TTTTTTTAGAAAAAT |
|
Position: -100
Score: 4.7 Sequence: AATTTTCAAAGAATT
Locus tag: RBAM_017250
|
||||
| RBAM_017250 | -100 | 4.7 | AATTTTCAAAGAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017250 | -100 | 4.7 | AATTTTCAAAGAATT |
| Anoxybacillus flavithermus WK1 | Aflv_1508 | -100 | 4.9 | AATTTTCAGAAAAAA |
|
Position: -169
Score: 4.7 Sequence: AATTTTCTCACAATT
Locus tag: RBAM_017790
|
||||
| RBAM_017790 | -169 | 4.7 | AATTTTCTCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sspO | ||||
| Ortholog function: Small, acid-soluble spore protein O | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17990 | -170 | 4.7 | AATTTTCTCACAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017790 | -169 | 4.7 | AATTTTCTCACAATT |
| Bacillus pumilus SAFR-032 | BPUM_1698 | -183 | 4.6 | AATTCTCAGAAAAAT |
| -152 | 4.7 | AATTTTCTCACAATT | ||
| Bacillus licheniformis DSM 13 | BLi02046 | -171 | 4.7 | AATTTTCTCACAATT |
| Oceanobacillus iheyensis HTE831 | OB0266 | -227 | 4.5 | AATATTCTGTTAATT |
|
Position: -77
Score: 4.7 Sequence: AATTGTGAGAAAATT
Locus tag: RBAM_017800
|
||||
| RBAM_017800 | -77 | 4.7 | AATTGTGAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citB | ||||
| Ortholog function: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU18000 | -72 | 4.7 | AATTGTGAGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017800 | -77 | 4.7 | AATTGTGAGAAAATT |
| Bacillus pumilus SAFR-032 | BPUM_1699 | -83 | 4.7 | AATTGTGAGAAAATT |
| -52 | 4.6 | ATTTTTCTGAGAATT | ||
| Bacillus licheniformis DSM 13 | BLi02047 | -78 | 4.7 | AATTGTGAGAAAATT |
|
Position: -49
Score: 4.4 Sequence: TATATTCTTACAATT
Locus tag: RBAM_019090
|
||||
| RBAM_019090 | -49 | 4.4 | TATATTCTTACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yocR | ||||
| Ortholog function: Putative sodium-dependent transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU19340 | -141 | 5 | AATTTTCTGAATAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_019090 | -49 | 4.4 | TATATTCTTACAATT |
| Bacillus licheniformis DSM 13 | BLi02256 | -163 | 4.8 | AATATTCTGAATAAT |
|
Position: -169
Score: 4.4 Sequence: AATTGTAAGAATATA
Locus tag: RBAM_019100
|
||||
| RBAM_019100 | -169 | 4.4 | AATTGTAAGAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yocS | ||||
| Ortholog function: Sodium-dependent transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU19350 | -92 | 5 | ATTATTCAGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_019100 | -169 | 4.4 | AATTGTAAGAATATA |
| Bacillus licheniformis DSM 13 | BLi02258 | -66 | 4.8 | ATTATTCAGAATATT |
|
Position: -280
Score: 4.6 Sequence: TTTTTTCTGAAAAAT
Locus tag: RBAM_019340
|
||||
| RBAM_019340 | -280 | 4.6 | TTTTTTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yodF | ||||
| Ortholog function: SSS family solute:sodium (Na+) symporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU19580 | -80 | 4.4 | TTTTTTCTAATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_019340 | -280 | 4.6 | TTTTTTCTGAAAAAT |
| Bacillus pumilus SAFR-032 | BPUM_1878 | -27 | 4.4 | AAATTACAAAAAATT |
| Bacillus licheniformis DSM 13 | BLi02278 | -81 | 4.4 | TTTTTTCTAATAATT |
|
Position: -67
Score: 4.5 Sequence: TATTATTTGAATATT
Locus tag: RBAM_019920
|
||||
| RBAM_019920 | -67 | 4.5 | TATTATTTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvA | ||||
| Ortholog function: Threonine dehydratase biosynthetic (EC 4.3.1.19) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU21770 | -68 | 4.8 | TATTTTTTGAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_019920 | -75 | 4.4 | AATTGTCTTATTATT |
| -67 | 4.5 | TATTATTTGAATATT | ||
| Bacillus pumilus SAFR-032 | BPUM_1911 | -64 | 4.8 | TATTTTTTGAATATT |
| Bacillus licheniformis DSM 13 | BLi02315 | -97 | 4.6 | AATATTCTGTAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_1453 | -99 | 5 | ATTTTTTAGAAAATT |
|
Position: -202
Score: 4.6 Sequence: ATTATTTAGAATATT
Position: -56
Score: 4.5 Sequence: AATAAACTGAAAATT
Locus tag: RBAM_020010
|
||||
| RBAM_020010 | -202 | 4.6 | ATTATTTAGAATATT | |
| -56 | 4.5 | AATAAACTGAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvD | ||||
| Ortholog function: Dihydroxy-acid dehydratase (EC 4.2.1.9) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU21870 | -64 | 4.5 | AATAAACTGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_020010 | -56 | 4.5 | AATAAACTGAAAATT |
| Bacillus pumilus SAFR-032 | BPUM_1922 | -83 | 4.5 | AATAAACAGAAAATT |
| Bacillus licheniformis DSM 13 | BLi02324 | -51 | 4.8 | AATATTCAGAATATA |
| Bacillus halodurans C-125 | BH3062 | -217 | 4.3 | AATAGTCAAATTATT |
| -111 | 4.5 | TATTTTTTGACTATT | ||
|
Position: -76
Score: 4.3 Sequence: AATTTTTTAAAAACA
Locus tag: RBAM_020410
|
||||
| RBAM_020410 | -76 | 4.3 | AATTTTTTAAAAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yppF | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU22260 | -76 | 4.3 | AATTTTTTAAAAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_020410 | -76 | 4.3 | AATTTTTTAAAAACA |
| Anoxybacillus flavithermus WK1 | Aflv_1145 | -68 | 4.4 | AATTTTTTGAATTTA |
| Bacillus cereus ATCC 14579 | BC1558 | -79 | 5.1 | AATTTTTAAAAAATT |
|
Position: -44
Score: 4.5 Sequence: AATTATCAGATATTT
Locus tag: RBAM_021220
|
||||
| RBAM_021220 | -44 | 4.5 | AATTATCAGATATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serA | ||||
| Ortholog function: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU23070 | -44 | 4.5 | AATTATCAGATATTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_021220 | -44 | 4.5 | AATTATCAGATATTT |
| Bacillus pumilus SAFR-032 | BPUM_2039 | -45 | 4.5 | AATTATCAGATATTT |
| Bacillus licheniformis DSM 13 | BLi02446 | -43 | 4.5 | AATTATCAGATATTT |
| Anoxybacillus flavithermus WK1 | Aflv_1055 | -47 | 4.8 | AATTATCAGAAATTT |
| Geobacillus kaustophilus HTA426 | GK2247 | -86 | 4.8 | AATTATCAGAAATTT |
|
Position: -96
Score: 4.6 Sequence: AATATTCATAAAAAT
Locus tag: RBAM_024530
|
||||
| RBAM_024530 | -96 | 4.6 | AATATTCATAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnQ | ||||
| Ortholog function: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27430 | -60 | 5 | AATTTTCAGAAAAGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_024530 | -126 | 4.5 | AATTATCAGAAATTA |
| -96 | 4.6 | AATATTCATAAAAAT | ||
|
Position: -98
Score: 4.5 Sequence: AATTGTCAATAAATT
Locus tag: RBAM_025520
|
||||
| RBAM_025520 | -98 | 4.5 | AATTGTCAATAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase, cytochrome b subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025520 | -98 | 4.5 | AATTGTCAATAAATT |
| Bacillus pumilus SAFR-032 | BPUM_2503 | -161 | 4.5 | AAATTTCGGAAAATT |
| -94 | 4.5 | AATTGTCAATAAATT | ||
| Bacillus licheniformis DSM 13 | BLi02994 | -184 | 4.5 | AATTTTCAAAAATAT |
| -165 | 4.9 | AAATTTTAGAAAATT | ||
|
Position: -213
Score: 4.5 Sequence: AATTTATTGACAATT
Locus tag: RBAM_025530
|
||||
| RBAM_025530 | -213 | 4.5 | AATTTATTGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yslB | ||||
| Ortholog function: Predicted hydrocarbon binding protein (V4R domain) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025530 | -213 | 4.5 | AATTTATTGACAATT |
| Bacillus pumilus SAFR-032 | BPUM_2504 | -201 | 4.5 | AATTTATTGACAATT |
| -134 | 4.5 | AATTTTCCGAAATTT | ||
| Bacillus licheniformis DSM 13 | BLi02995 | -151 | 4.9 | AATTTTCTAAAATTT |
| -132 | 4.5 | ATATTTTTGAAAATT | ||
|
Position: -224
Score: 4.2 Sequence: ATTAATCAGATTATT
Locus tag: RBAM_026180
|
||||
| RBAM_026180 | -224 | 4.2 | ATTAATCAGATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citZ | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -224 | 4.3 | AAATGTCTGATTATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -224 | 4.2 | ATTAATCAGATTATT |
| Bacillus pumilus SAFR-032 | BPUM_2556 | -210 | 4.3 | AAATGTCTGATTATT |
| Bacillus licheniformis DSM 13 | BLi03062 | -225 | 4.5 | AAATGTCTGATAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -209 | 4.3 | AAAAGTCTGATAATT |
| Geobacillus kaustophilus HTA426 | GK2736 | -201 | 4.3 | AAAAGTCTGATAATT |
| Oceanobacillus iheyensis HTE831 | OB2168 | -222 | 4.3 | AAATATTAAAAAATT |
|
Position: -172
Score: 4.6 Sequence: ATTTATCAGAAAATA
Locus tag: RBAM_026400
|
||||
| RBAM_026400 | -172 | 4.6 | ATTTATCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29470 | -182 | 4 | atgTgTCtGAaAata |
| Bacillus amyloliquefaciens FZB42 | RBAM_026400 | -172 | 4.6 | ATTTATCAGAAAATA |
| Bacillus pumilus SAFR-032 | BPUM_2579 | -206 | 4.7 | ATTATTCAGAAAATA |
| Bacillus licheniformis DSM 13 | BLi03086 | -194 | 4.8 | TATATTCAGAAAATA |
|
Position: -152
Score: 4.7 Sequence: AATTGTCAGATAATA
Locus tag: RBAM_026520
|
||||
| RBAM_026520 | -152 | 4.7 | AATTGTCAGATAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iscS | ||||
| Ortholog function: Cysteine desulfurase (EC 2.8.1.7) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29590 | -165 | 4.6 | AATATTCTGTCAATT |
| -150 | 4.7 | AATTGTCAGATAATA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_026520 | -167 | 4.6 | AATATTCTGTCAATT |
| -152 | 4.7 | AATTGTCAGATAATA | ||
| Bacillus licheniformis DSM 13 | BLi03101 | -165 | 4.8 | AATTTTCTGTCAATT |
|
Position: -56
Score: 4.7 Sequence: TATTATCTGACAATT
Position: -41
Score: 4.6 Sequence: AATTGACAGAATATT
Locus tag: RBAM_026530
|
||||
| RBAM_026530 | -56 | 4.7 | TATTATCTGACAATT | |
| -41 | 4.6 | AATTGACAGAATATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: braB | ||||
| Ortholog function: Branched-chain amino acid transport system carrier protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29600 | -59 | 4.7 | TATTATCTGACAATT |
| -44 | 4.6 | AATTGACAGAATATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_026530 | -56 | 4.7 | TATTATCTGACAATT |
| -41 | 4.6 | AATTGACAGAATATT | ||
| Bacillus pumilus SAFR-032 | BPUM_2605 | -44 | 4.5 | AATTAACAGAATATT |
|
Position: -73
Score: 4.6 Sequence: TATATTTTAAAAATT
Locus tag: RBAM_026800
|
||||
| RBAM_026800 | -73 | 4.6 | TATATTTTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -78 | 4.6 | TATATTTTAAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -73 | 4.6 | TATATTTTAAAAATT |
| Bacillus pumilus SAFR-032 | BPUM_2616 | -77 | 4.6 | AGTTTTTTAAAAATT |
| Bacillus licheniformis DSM 13 | BLi03119 | -74 | 4.8 | TATTTTTTAAAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0462 | -77 | 5.1 | AATTTTTTAAAAATT |
| Geobacillus kaustophilus HTA426 | GK2806 | -102 | 4.4 | AAATTTCAAAAAAGT |
| -77 | 4.9 | AATATTTTAAAAATT | ||
| Bacillus cereus ATCC 14579 | BC4659 | -69 | 4.8 | AATATACTGAAAATT |
|
Position: -100
Score: 4.6 Sequence: AATTTTTAAAATATA
Locus tag: RBAM_026810
|
||||
| RBAM_026810 | -100 | 4.6 | AATTTTTAAAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29690 | -97 | 4.6 | AATTTTTAAAATATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026810 | -100 | 4.6 | AATTTTTAAAATATA |
| Bacillus pumilus SAFR-032 | BPUM_2617 | -93 | 4.6 | AATTTTTAAAAAACT |
| Bacillus licheniformis DSM 13 | BLi03120 | -96 | 4.8 | AATTTTTAAAAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_0461 | -101 | 5.1 | AATTTTTAAAAAATT |
| Geobacillus kaustophilus HTA426 | GK2807 | -112 | 4.9 | AATTTTTAAAATATT |
| -87 | 4.4 | ACTTTTTTGAAATTT | ||
| Bacillus cereus ATCC 14579 | BC4660 | -110 | 4.8 | AATTTTCAGTATATT |
| Oceanobacillus iheyensis HTE831 | OB2221 | -85 | 4.6 | AAATTTCAAAAAATA |
|
Position: -70
Score: 4.9 Sequence: ATTTTTCTGAAAAAT
Locus tag: RBAM_027650
|
||||
| RBAM_027650 | -70 | 4.9 | ATTTTTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytkC | ||||
| Ortholog function: Hypothetical membrane protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU30640 | -82 | 4.9 | ATTTTTCTGAAAAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_027650 | -70 | 4.9 | ATTTTTCTGAAAAAT |
| Bacillus licheniformis DSM 13 | BLi03206 | -88 | 4.7 | AATTGTCAAACAATT |
|
Position: -84
Score: 4.7 Sequence: ACTTATCAGAAAATT
Locus tag: RBAM_028120
|
||||
| RBAM_028120 | -84 | 4.7 | ACTTATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yuaF | ||||
| Ortholog function: Hypothetical membrane protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU31020 | -96 | 4.6 | ATTTGTCTTAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_028120 | -84 | 4.7 | ACTTATCAGAAAATT |
|
Position: -77
Score: 4.7 Sequence: AATTTTCTGATAAGT
Locus tag: RBAM_028130
|
||||
| RBAM_028130 | -77 | 4.7 | AATTTTCTGATAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yuaE | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU31030 | -86 | 4.6 | AATTTTAAGACAAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_028130 | -77 | 4.7 | AATTTTCTGATAAGT |
|
Position: -93
Score: 4.4 Sequence: TATTTTTAGAAAATG
Locus tag: RBAM_028570
|
||||
| RBAM_028570 | -93 | 4.4 | TATTTTTAGAAAATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kapD | ||||
| Ortholog function: KapD, inhibitor of KinA pathway to sporulation | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU31470 | -90 | 4.4 | TATTTTTAGAAAATG |
| Bacillus amyloliquefaciens FZB42 | RBAM_028570 | -93 | 4.4 | TATTTTTAGAAAATG |
|
Position: -178
Score: 4.4 Sequence: CATTTTCTAAAAATA
Locus tag: RBAM_028580
|
||||
| RBAM_028580 | -178 | 4.4 | CATTTTCTAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yuxJ | ||||
| Ortholog function: MFS family major facilitator transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU31480 | -135 | 4.4 | CATTTTCTAAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_028580 | -178 | 4.4 | CATTTTCTAAAAATA |
| Bacillus licheniformis DSM 13 | BLi03330 | -68 | 4.6 | TATTTTCTGAAAATG |
|
Position: -244
Score: 4.5 Sequence: TATTTTTTAAAAAAT
Position: -243
Score: 4.5 Sequence: ATTTTTTAAAAAATA
Locus tag: RBAM_028640
|
||||
| RBAM_028640 | -244 | 4.5 | TATTTTTTAAAAAAT | |
| -243 | 4.5 | ATTTTTTAAAAAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupN | ||||
| Ortholog function: Guanosine ABC transport system, substrate-binding component | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU31540 | -102 | 4.9 | TATTATCAGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_028640 | -244 | 4.5 | TATTTTTTAAAAAAT |
| -243 | 4.5 | ATTTTTTAAAAAATA | ||
| Bacillus pumilus SAFR-032 | BPUM_2823 | -233 | 4.5 | ATTTTTTTAAAAATA |
|
Position: -34
Score: 4.9 Sequence: TATTATCAGAAAATT
Locus tag: RBAM_029140
|
||||
| RBAM_029140 | -34 | 4.9 | TATTATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yuiA | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32090 | -36 | 4.9 | TATTATCAGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_029140 | -34 | 4.9 | TATTATCAGAAAATT |
| Geobacillus kaustophilus HTA426 | GK2951 | -54 | 4.4 | TTTTTACAGAAAATT |
| Bacillus halodurans C-125 | BH3406 | -47 | 4.3 | AAAATTCTGATAATA |
|
Position: -185
Score: 4.8 Sequence: AATATTTAGAAAATA
Locus tag: RBAM_029370
|
||||
| RBAM_029370 | -185 | 4.8 | AATATTTAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hom | ||||
| Ortholog function: Homoserine dehydrogenase (EC 1.1.1.3) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32260 | -183 | 4.5 | AATAATTAGAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029370 | -185 | 4.8 | AATATTTAGAAAATA |
| Bacillus pumilus SAFR-032 | BPUM_2888 | -185 | 4.8 | AATATTTTGAAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_2414 | -88 | 4.7 | TTTTTTTAGAAAATT |
|
Position: -103
Score: 4.8 Sequence: AAATTTCAGAAAATA
Locus tag: RBAM_029670
|
||||
| RBAM_029670 | -103 | 4.8 | AAATTTCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: frlB | ||||
| Ortholog function: Fructoselysine 6-phosphate deglycase (EC 3.5.-.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32610 | -100 | 4.8 | AAATTTCAGAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029670 | -103 | 4.8 | AAATTTCAGAAAATA |
|
Position: -132
Score: 4.5 Sequence: AAATTTAAAAAAATT
Locus tag: RBAM_029920
|
||||
| RBAM_029920 | -132 | 4.5 | AAATTTAAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadN | ||||
| Ortholog function: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_029920 | -132 | 4.5 | AAATTTAAAAAAATT |
| Bacillus licheniformis DSM 13 | BLi03466 | -132 | 4.4 | AAAATTCAGAAATTT |
| Bacillus cereus ATCC 14579 | BC5004 | -141 | 4.5 | TTATTTCAGAAAATT |
| Bacillus halodurans C-125 | BH3488 | -134 | 4.8 | AATTTTCAGAAAATC |
|
Position: -66
Score: 4.8 Sequence: AATTGTCTGAAAAGT
Locus tag: RBAM_031050
|
||||
| RBAM_031050 | -66 | 4.8 | AATTGTCTGAAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuBA | ||||
| Ortholog function: Choline ABC transport system, ATP-binding protein OpuBA | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33730 | -65 | 4.9 | AATTGTCTGAAAAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_031050 | -66 | 4.8 | AATTGTCTGAAAAGT |
|
Position: -41
Score: 4.7 Sequence: ACTTTTCAGAAAAAT
Locus tag: RBAM_031100
|
||||
| RBAM_031100 | -41 | 4.7 | ACTTTTCAGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCA | ||||
| Ortholog function: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33830 | -42 | 5 | ACTTTTCAGAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_031100 | -41 | 4.7 | ACTTTTCAGAAAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3043 | -43 | 5 | AATTTTCTGAATATA |
|
Position: -44
Score: 4.8 Sequence: TATTTTCAGAAAAGT
Locus tag: RBAM_033730
|
||||
| RBAM_033730 | -44 | 4.8 | TATTTTCAGAAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spoIIQ | ||||
| Ortholog function: Stage II sporulation protein related to metaloproteases (SpoIIQ) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU36550 | -44 | 4.8 | TATTTTCAGAAAAGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_033730 | -44 | 4.8 | TATTTTCAGAAAAGT |
| Bacillus licheniformis DSM 13 | BLi03892 | -43 | 4.8 | TATTTTCTGAAAAGT |
|
Position: -251
Score: 4.6 Sequence: AATATTCTATAAATT
Locus tag: RBAM_033830
|
||||
| RBAM_033830 | -251 | 4.6 | AATATTCTATAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ureA | ||||
| Ortholog function: Urease gamma subunit (EC 3.5.1.5) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU36660 | -890 | 4.9 | AATTTTTTAAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_033830 | -251 | 4.6 | AATATTCTATAAATT |
|
Position: -67
Score: 4.5 Sequence: TATTTTCAAATAATA
Position: -26
Score: 4.4 Sequence: TATTTACTTAAAATT
Locus tag: RBAM_034930
|
||||
| RBAM_034930 | -67 | 4.5 | TATTTTCAAATAATA | |
| -26 | 4.4 | TATTTACTTAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bacA | ||||
| Ortholog function: Prephenate dehydratase (EC 4.2.1.51) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU37740 | -36 | 4.7 | AATTTACTTAAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_034930 | -67 | 4.5 | TATTTTCAAATAATA |
| -26 | 4.4 | TATTTACTTAAAATT | ||
|
Position: -48
Score: 4.3 Sequence: TATTTTCAAATAAGT
Locus tag: RBAM_035750
|
||||
| RBAM_035750 | -48 | 4.3 | TATTTTCAAATAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybgE | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02390 | -118 | 4.9 | AATATTCTGAAATTT |
| -38 | 4.6 | AATATTTAAACAATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_002760 | -152 | 4.4 | AAAATTTTGATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_035750 | -48 | 4.3 | TATTTTCAAATAAGT |
| Bacillus pumilus SAFR-032 | BPUM_3500 | -226 | 4.4 | AATTGTCAGATTAAT |
|
Position: -188
Score: 4.4 Sequence: TTTATTCTGAAAAAT
Locus tag: RBAM_036120
|
||||
| RBAM_036120 | -188 | 4.4 | TTTATTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metE2 | ||||
| Ortholog function: Methionine synthase II (cobalamin-independent) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU38950 | -225 | 4.7 | AATATTAAGATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_036120 | -188 | 4.4 | TTTATTCTGAAAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3562 | -227 | 4.4 | TTTATTAAGAAAATT |
|
Position: -36
Score: 4.5 Sequence: AGTTATCAGAATATT
Locus tag: RBAM_036400
|
||||
| RBAM_036400 | -36 | 4.5 | AGTTATCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hutP | ||||
| Ortholog function: Hut operon positive regulatory protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39340 | -25 | 4.1 | AGTTATCAGAATTTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_036400 | -36 | 4.5 | AGTTATCAGAATATT |
| Bacillus cereus ATCC 14579 | BC3653 | -36 | 4.8 | AATATTCAAATAATT |
|
Position: -39
Score: 4.5 Sequence: ACTATTCTGAAAAAT
Locus tag: RBAM_038050
|
||||
| RBAM_038050 | -39 | 4.5 | ACTATTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: RBAM_038050 | ||||
| Ortholog function: Acetyltransferase, GNAT family protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_038050 | -39 | 4.5 | ACTATTCTGAAAAAT |