Propagation of PedR regulog to Synechococcus elongatus PCC 6301
| Source regulog: | PedR - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | repressor (activator) |
| Biological process: | Photosynthesis; Carbon fixation |
| Effector: | Trx, thioredoxin protein |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechococcus elongatus PCC 6301 |
| Orthologous TF(s) | syc1834_d |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -87
Score: 4.4 Sequence: GAGTATTTTTACTC
Locus tag: syc0117_d
|
||||
| syc0117_d | -87 | 4.4 | GAGTATTTTTACTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndhD | ||||
| Ortholog function: NADH dehydrogenase subunit | ||||
| Synechococcus elongatus PCC 7942 | Synpcc7942_1439 | -87 | 4.4 | GAGTATTTTTACTC |
| -42 | 4.2 | AAGCAAATCTGCTT | ||
|
Position: -30
Score: 4.7 Sequence: AAGTACAAATACTT
Locus tag: syc1834_d
|
||||
| syc1834_d | -30 | 4.7 | AAGTACAAATACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pedR | ||||
| Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family | ||||
| Cyanothece sp. ATCC 51142 | cce_4720 | -29 | 4.7 | AAGTAAATGTACTA |
| Cyanothece sp. PCC 7425 | Cyan7425_0293 | -28 | 4.3 | AAGTAATTGTACGG |
| Cyanothece sp. PCC 8801 | PCC8801_4139 | -28 | 4.7 | AAGTAAATGTACTA |
| Microcystis aeruginosa NIES-843 | MAE_54580 | -28 | 4.7 | AAGTAAATATACGA |
| Nostoc sp. PCC 7120 | asl2551 | -194 | 4.5 | AAGTATATTTAATT |
| -33 | 4.6 | AAGTACATATACCA | ||
| Prochlorococcus marinus str. MIT 9313 | PMT2014 | -366 | 3.7 | AAGTAAATCTGATT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2264 | -30 | 4.7 | AAGTACAAATACTT |
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0641 | -257 | 3.7 | AAGAAAGTTTATCT |
| Synechocystis sp. PCC 6803 | ssl0564 | -28 | 4.8 | GAGTAAATATACCT |
| Thermosynechococcus elongatus BP-1 | null | -22 | 4.6 | AAGTAATTATACGG |
| Trichodesmium erythraeum IMS101 | Tery_2735 | -34 | 5.2 | AAGCAAATATACTT |