Propagation of PedR regulog to Synechococcus elongatus PCC 6301

Reference regulog properties
Source regulog:	PedR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Synechococcus elongatus PCC 6301
Orthologous TF(s)	syc1834_d
Regulated genes	3

Built upon 56 sites [see more]

Predicted regulatory interactions in *Synechococcus elongatus PCC 6301*
	Locus tag	Position	Score	Sequence
Position: -87 Score: 4.4 Sequence: GAGTATTTTTACTC Locus tag: syc0117_d
	syc0117_d	-87	4.4	GAGTATTTTTACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhD
Ortholog function: NADH dehydrogenase subunit
Synechococcus elongatus PCC 7942	Synpcc7942_1439	-87	4.4	GAGTATTTTTACTC
		-42	4.2	AAGCAAATCTGCTT

Position: -30 Score: 4.7 Sequence: AAGTACAAATACTT Locus tag: syc1834_d
	syc1834_d	-30	4.7	AAGTACAAATACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pedR
Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family
Cyanothece sp. ATCC 51142	cce_4720	-29	4.7	AAGTAAATGTACTA
Cyanothece sp. PCC 7425	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Cyanothece sp. PCC 8801	PCC8801_4139	-28	4.7	AAGTAAATGTACTA
Microcystis aeruginosa NIES-843	MAE_54580	-28	4.7	AAGTAAATATACGA
Nostoc sp. PCC 7120	asl2551	-194	4.5	AAGTATATTTAATT
		-33	4.6	AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313	PMT2014	-366	3.7	AAGTAAATCTGATT
Synechococcus elongatus PCC 7942	Synpcc7942_2264	-30	4.7	AAGTACAAATACTT
Synechococcus sp. PCC 7002	SYNPCC7002_A0641	-257	3.7	AAGAAAGTTTATCT
Synechocystis sp. PCC 6803	ssl0564	-28	4.8	GAGTAAATATACCT
Thermosynechococcus elongatus BP-1	null	-22	4.6	AAGTAATTATACGG
Trichodesmium erythraeum IMS101	Tery_2735	-34	5.2	AAGCAAATATACTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --