Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pedR gene

Properties
Regulog: PedR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Phylum: Cyanobacteria
Built upon 56 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -29
Score: 4.72316
Sequence: AAGTAAATGTACTA
Locus tag: cce_4720
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -29 4.7 AAGTAAATGTACTA cce_4720
Cyanothece sp. PCC 7425
Position: -28
Score: 4.29687
Sequence: AAGTAATTGTACGG
Locus tag: Cyan7425_0293
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -28 4.3 AAGTAATTGTACGG Cyan7425_0293
Cyanothece sp. PCC 8801
Position: -28
Score: 4.72316
Sequence: AAGTAAATGTACTA
Locus tag: PCC8801_4139
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -28 4.7 AAGTAAATGTACTA PCC8801_4139
Microcystis aeruginosa NIES-843
Position: -28
Score: 4.74568
Sequence: AAGTAAATATACGA
Locus tag: MAE_54580
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -28 4.7 AAGTAAATATACGA MAE_54580
Nostoc sp. PCC 7120
Position: -194
Score: 4.48539
Sequence: AAGTATATTTAATT
Position: -33
Score: 4.60578
Sequence: AAGTACATATACCA
Locus tag: asl2551
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -194 4.5 AAGTATATTTAATT asl2551
-33 4.6 AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313
Position: -366
Score: 3.7302
Sequence: AAGTAAATCTGATT
Locus tag: PMT2014
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -366 3.7 AAGTAAATCTGATT PMT2014
Synechococcus elongatus PCC 7942
Position: -30
Score: 4.6803
Sequence: AAGTACAAATACTT
Locus tag: Synpcc7942_2264
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -30 4.7 AAGTACAAATACTT Synpcc7942_2264
Synechococcus sp. PCC 7002
Position: -257
Score: 3.68573
Sequence: AAGAAAGTTTATCT
Locus tag: SYNPCC7002_A0641
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -257 3.7 AAGAAAGTTTATCT SYNPCC7002_A0641
Synechocystis sp. PCC 6803
Position: -28
Score: 4.82382
Sequence: GAGTAAATATACCT
Locus tag: ssl0564
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -28 4.8 GAGTAAATATACCT ssl0564
Thermosynechococcus elongatus BP-1
Position: -22
Score: 4.64434
Sequence: AAGTAATTATACGG
Locus tag: null
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -22 4.6 AAGTAATTATACGG null
Trichodesmium erythraeum IMS101
Position: -34
Score: 5.16069
Sequence: AAGCAAATATACTT
Locus tag: Tery_2735
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR -34 5.2 AAGCAAATATACTT Tery_2735
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