Propagation of PedR regulog to Anabaena variabilis ATCC 29413

Reference regulog properties
Source regulog:	PedR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Anabaena variabilis ATCC 29413
Orthologous TF(s)	Ava_0483
Regulated genes	8

Built upon 56 sites [see more]

Predicted regulatory interactions in *Anabaena variabilis ATCC 29413*
	Locus tag	Position	Score	Sequence
Position: -194 Score: 3.6 Sequence: AAGTATATTTTGTG Position: -33 Score: 4.6 Sequence: AAGTACATATACCA Locus tag: Ava_0483
	Ava_0483	-194	3.6	AAGTATATTTTGTG
		-33	4.6	AAGTACATATACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pedR
Ortholog function: Thioredoxin status sensitive transcription regulator, LuxR family
Cyanothece sp. ATCC 51142	cce_4720	-29	4.7	AAGTAAATGTACTA
Cyanothece sp. PCC 7425	Cyan7425_0293	-28	4.3	AAGTAATTGTACGG
Cyanothece sp. PCC 8801	PCC8801_4139	-28	4.7	AAGTAAATGTACTA
Microcystis aeruginosa NIES-843	MAE_54580	-28	4.7	AAGTAAATATACGA
Nostoc sp. PCC 7120	asl2551	-194	4.5	AAGTATATTTAATT
		-33	4.6	AAGTACATATACCA
Prochlorococcus marinus str. MIT 9313	PMT2014	-366	3.7	AAGTAAATCTGATT
Synechococcus elongatus PCC 7942	Synpcc7942_2264	-30	4.7	AAGTACAAATACTT
Synechococcus sp. PCC 7002	SYNPCC7002_A0641	-257	3.7	AAGAAAGTTTATCT
Synechocystis sp. PCC 6803	ssl0564	-28	4.8	GAGTAAATATACCT
Thermosynechococcus elongatus BP-1	null	-22	4.6	AAGTAATTATACGG
Trichodesmium erythraeum IMS101	Tery_2735	-34	5.2	AAGCAAATATACTT

Position: -20 Score: 4.5 Sequence: AAGTATTTTTGCTT Locus tag: Ava_2308
	Ava_2308	-20	4.5	AAGTATTTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhD2
Ortholog function: NADH dehydrogenase subunit
Cyanothece sp. PCC 7425	Cyan7425_0836	-110	4.2	AAGTAGGTTTACCC
		-8	4.4	AAGTATTTATGCTC
Microcystis aeruginosa NIES-843	MAE_42210	-20	4.2	AGGTATTTTTTCTT
Nostoc sp. PCC 7120	alr5050	-23	4.5	AAGTATTTTTGCTT
Synechocystis sp. PCC 6803	slr1291	-20	4.3	AGGTATTTATTCTT
Trichodesmium erythraeum IMS101	Tery_3241	-103	4.7	AAGTATATATATTT
		-20	4.1	AAGTATTTGTGCTC

Position: -7 Score: 3.7 Sequence: AAGCAAAATGACCA Locus tag: Ava_2330
	Ava_2330	-7	3.7	AAGCAAAATGACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase subunit N
Cyanothece sp. ATCC 51142	cce_4534	-365	4.9	AAGTAAGTTTACCT
Cyanothece sp. PCC 8801	PCC8801_0789	-357	4.7	AAGCAACTTTACCT
Nostoc sp. PCC 7120	all5076	-7	3.7	AAGCAAAATGACCA
Synechocystis sp. PCC 6803	slr0750	-242	3.5	AATTAAAATTAATC

Position: -163 Score: 4.2 Sequence: GAGTATTTATTCCT Position: -62 Score: 4.3 Sequence: AAGTAACAATTCCT Locus tag: Ava_2796
	Ava_2796	-163	4.2	GAGTATTTATTCCT
		-62	4.3	AAGTAACAATTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhD
Ortholog function: NADH dehydrogenase subunit
Nostoc sp. PCC 7120	alr0348	-160	4.2	GAGTATTTATTCCT
		-119	4.1	GAGTATAAATTCCT
		-59	4.3	AAGTAACAATTCCT

Position: -56 Score: 3.7 Sequence: AAGCACTTATAGTC Locus tag: Ava_3466
	Ava_3466	-56	3.7	AAGCACTTATAGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlB
Ortholog function: Light-independent protochlorophyllide reductase subunit B
Microcystis aeruginosa NIES-843	MAE_53860	-319	4.5	AAGCAAAATTACCG
Nostoc sp. PCC 7120	alr3441	-56	3.7	AAGCACTTATAGTC
Synechococcus sp. PCC 7002	SYNPCC7002_A1652	-14	4.6	GAGTAAAAATACCT
Synechocystis sp. PCC 6803	slr0772	-182	3.4	AAGCATTAAGAATT
Trichodesmium erythraeum IMS101	Tery_3812	-177	4.1	AGTTAAAAATACTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of PedR regulog to Anabaena variabilis ATCC 29413

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --