Propagation of CcmR regulog to Gloeobacter violaceus PCC 7421

Reference regulog properties
Source regulog:	CcmR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Gloeobacter violaceus PCC 7421
Orthologous TF(s)	gll1001
Regulated genes	3

Built upon 72 sites [see more]

Predicted regulatory interactions in *Gloeobacter violaceus PCC 7421*
	Locus tag	Position	Score	Sequence
Position: -34 Score: 5.2 Sequence: ATAGAACTATGTCTAT Locus tag: gll1001
	gll1001	-34	5.2	ATAGAACTATGTCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccmR
Ortholog function: Carbon assimilation transcriptional regulator, LysR family
Cyanothece sp. PCC 7425	Cyan7425_3855	-93	5.9	ATAGATTTTTGTCTAT
Gloeobacter violaceus PCC 7421	gll1001	-34	5.2	ATAGAACTATGTCTAT
Nostoc sp. PCC 7120	all0862	-285	5.8	ATAGATTTTTATCTAT
		-146	5.8	ATAGATTTTTATCTAT
		-72	4.9	CTAGTCTTATATCTAT
Synechococcus elongatus PCC 7942	Synpcc7942_1310	-34	5.7	ATAGACTTAAATCTAT
Synechococcus sp. PCC 7002	SYNPCC7002_A0171	-63	5	ATTGACTCTAGTCTAT
Thermosynechococcus elongatus BP-1	tlr2037	-42	5.1	ATAGAATTTCGTCTAT

Position: -171 Score: 4.2 Sequence: ATAGATGAAAGTCGAT Position: -139 Score: 5 Sequence: ATCTACTTTTATCTAT Locus tag: gvip132
	gvip132	-171	4.2	ATAGATGAAAGTCGAT
		-139	5	ATCTACTTTTATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhF3
Ortholog function: NADH dehydrogenase subunit F
Cyanothece sp. ATCC 51142	cce_0603	-74	5.5	ATAGACTTAATTCTAT
Cyanothece sp. PCC 8801	PCC8801_4247	-71	5.6	ATAGACTAAAGTCTAT
		-8	5	ATTGTTATATGTCTAT
Gloeobacter violaceus PCC 7421	gvip132	-139	5	ATCTACTTTTATCTAT
Microcystis aeruginosa NIES-843	MAE_15120	-71	4.9	ATTGACTAGAATCTAT
Nostoc sp. PCC 7120	alr4156	-245	5.9	ATAGATTTTTGTCTAT
Synechococcus sp. JA-3-3Ab	CYA_0640	-107	5	CTTGATTTTTGTCTAT
Synechococcus sp. PCC 7002	SYNPCC7002_A0172	-63	5	ATTGACTCTAGTCTAT
Synechocystis sp. PCC 6803	sll1732	-204	3.9	ATTGTCGCTTGACTAT

Position: -168 Score: 5.6 Sequence: ATAGATTAATATCTAT Locus tag: gvip279
	gvip279	-168	5.6	ATAGATTAATATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cmpA
Ortholog function: Bicarbontate ABC transporter, substrate-binding protein
Gloeobacter violaceus PCC 7421	gvip279	-168	5.6	ATAGATTAATATCTAT
		-136	5	ATCGACTTTTCTCTAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CcmR regulog to Gloeobacter violaceus PCC 7421

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --