Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Lyngbya sp. PCC 8106

Reference regulog properties
Source regulog: Zur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Lyngbya sp. PCC 8106
Orthologous TF(s) L8106_17827
Regulated genes 7
Built upon 84 sites [see more]
Predicted regulatory interactions in Lyngbya sp. PCC 8106
Locus tag Position Score Sequence
Position: -86
Score: 6
Sequence: ACTAAAATGATTATCATTTTACT
Locus tag: L8106_05296
L8106_05296 -86 6 ACTAAAATGATTATCATTTTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_4862 -72 6.1 AAATTAACGATAATCATTCTCAT
-46 6.4 ATAATAATGGTTATCATTTTAAT
Cyanothece sp. PCC 7425 Cyan7425_1915 -104 6.4 AAGGCAATGATAATCATTATCAT
Nostoc sp. PCC 7120 all0833 -110 6.2 ATGAGAATGAGAATTATTATAAT
-80 5 TGTACAATAAGTATCATTGTCAA
Trichodesmium erythraeum IMS101 Tery_4951 -49 6.9 AAAAGAATGATAATCATTATCAT
Synechococcus sp. JA-3-3Ab CYA_2532 -39 5.7 TTATGATTGATTATCATTCTCAT
Thermosynechococcus elongatus BP-1 tlr2062 -31 6.3 ATGAGAATGATTATCATTCATCT
Position: -92
Score: 4.8
Sequence: TTTTGAATGATTTTCATATTCTT
Locus tag: L8106_28806
L8106_28806 -92 4.8 TTTTGAATGATTTTCATATTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1485
Ortholog function: Predicted Mn/Zn chelate ABC transporter, ATP-binding protein
Cyanothece sp. PCC 8801 PCC8801_2484 -84 4.9 CTCATAATGATTTTCATAATTGT
Position: -35
Score: 4.8
Sequence: AAGAATATGAAAATCATTCAAAA
Locus tag: L8106_28811
L8106_28811 -35 4.8 AAGAATATGAAAATCATTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1484
Ortholog function: Predicted Mn/Zn chelate ABC transporter, substrate-binding protein
Cyanothece sp. PCC 8801 PCC8801_2483 -53 4.9 ACAATTATGAAAATCATTATGAG
Position: -37
Score: 6.4
Sequence: AACATAATGATAATCATTATCGT
Locus tag: L8106_25310
L8106_25310 -37 6.4 AACATAATGATAATCATTATCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1484
Ortholog function: Predicted Mn/Zn chelate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_1484 -40 6.7 ACTAGAATGATTATCATTATCAT
Cyanothece sp. PCC 8801 PCC8801_0773 -40 7 ATTAGAATGATTATCATTATCAT
Cyanothece sp. PCC 7425 Cyan7425_0822 -29 5.2 TTGAAAATGAGAATGGTTCTTAT
Synechococcus elongatus PCC 7942 Synpcc7942_1316 -59 4.9 TAGGGAATGATAACGATTCTCAA
Position: -38
Score: 6.4
Sequence: ACGATAATGATTATCATTATGTT
Locus tag: L8106_25315
L8106_25315 -38 6.4 ACGATAATGATTATCATTATGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1485
Ortholog function: Predicted Mn/Zn chelate ABC transporter, ATP-binding protein
Cyanothece sp. ATCC 51142 cce_1485 -31 6.7 ATGATAATGATAATCATTCTAGT
Cyanothece sp. PCC 8801 PCC8801_0774 -32 7 ATGATAATGATAATCATTCTAAT
Cyanothece sp. PCC 7425 Cyan7425_0794 -29 5.3 ATAAGAATTATTCTCATTTTCAC
Synechococcus elongatus PCC 7942 Synpcc7942_1317 -59 4.9 TAGGGAATGATAACGATTCTCAA
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